RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 SPATA8Q6RVD6 105 aa5.59□□□□□ -1.51
GTF2F1-203ENST00000594213 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
GTF2F1-203ENST00000594213 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
GTF2F1-203ENST00000594213 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
GTF2F1-203ENST00000594213 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
GTF2F1-203ENST00000594213 COA5Q86WW8 74 aa5.55□□□□□ -1.52
GTF2F1-203ENST00000594213 SEC61GP60059 68 aa5.51□□□□□ -1.53
GTF2F1-203ENST00000594213 A0A1B0GU33 70 aa5.5□□□□□ -1.53
GTF2F1-203ENST00000594213 BRK1Q8WUW1 75 aa5.48□□□□□ -1.53
GTF2F1-203ENST00000594213 C10orf95Q9H7T3 257 aa5.47□□□□□ -1.53
GTF2F1-203ENST00000594213 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
GTF2F1-203ENST00000594213 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
GTF2F1-203ENST00000594213 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
GTF2F1-203ENST00000594213 PSPHP1O15172 72 aa5.36□□□□□ -1.55
GTF2F1-203ENST00000594213 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
GTF2F1-203ENST00000594213 LINC01558Q9Y6Z2 57 aa5.36□□□□□ -1.55
GTF2F1-203ENST00000594213 TNP1P09430 55 aa5.35□□□□□ -1.55
GTF2F1-203ENST00000594213 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
GTF2F1-203ENST00000594213 A8MU10 97 aa5.32□□□□□ -1.56
GTF2F1-203ENST00000594213 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
GTF2F1-203ENST00000594213 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
GTF2F1-203ENST00000594213 A6NED7 52 aa5.27□□□□□ -1.57
GTF2F1-203ENST00000594213 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
GTF2F1-203ENST00000594213 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
GTF2F1-203ENST00000594213 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
GTF2F1-203ENST00000594213 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
GTF2F1-203ENST00000594213 A0A1B0GU69 56 aa5.23□□□□□ -1.57
GTF2F1-203ENST00000594213 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
GTF2F1-203ENST00000594213 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
GTF2F1-203ENST00000594213 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
GTF2F1-203ENST00000594213 UQCR11O14957 56 aa5.1□□□□□ -1.59
GTF2F1-203ENST00000594213 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
GTF2F1-203ENST00000594213 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
GTF2F1-203ENST00000594213 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
GTF2F1-203ENST00000594213 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
GTF2F1-203ENST00000594213 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
GTF2F1-203ENST00000594213 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
GTF2F1-203ENST00000594213 K7ERS5 55 aa4.86□□□□□ -1.63
GTF2F1-203ENST00000594213 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
GTF2F1-203ENST00000594213 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
GTF2F1-203ENST00000594213 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
GTF2F1-203ENST00000594213 MUC5BQ9HC84 5762 aaPredicted RBP4.79□□□□□ -1.64
GTF2F1-203ENST00000594213 MT1AP04731 61 aa4.79□□□□□ -1.64
GTF2F1-203ENST00000594213 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
GTF2F1-203ENST00000594213 KRTAP5-8O75690 187 aa4.77□□□□□ -1.65
GTF2F1-203ENST00000594213 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
GTF2F1-203ENST00000594213 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
GTF2F1-203ENST00000594213 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
GTF2F1-203ENST00000594213 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
GTF2F1-203ENST00000594213 ROMO1P60602 79 aa4.62□□□□□ -1.67
GTF2F1-203ENST00000594213 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
GTF2F1-203ENST00000594213 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
GTF2F1-203ENST00000594213 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
GTF2F1-203ENST00000594213 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
GTF2F1-203ENST00000594213 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
GTF2F1-203ENST00000594213 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
GTF2F1-203ENST00000594213 MT3P25713 68 aa4.38□□□□□ -1.71
GTF2F1-203ENST00000594213 H3BS24 57 aa4.24□□□□□ -1.73
GTF2F1-203ENST00000594213 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
GTF2F1-203ENST00000594213 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
GTF2F1-203ENST00000594213 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
GTF2F1-203ENST00000594213 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
GTF2F1-203ENST00000594213 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
GTF2F1-203ENST00000594213 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
GTF2F1-203ENST00000594213 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
GTF2F1-203ENST00000594213 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
GTF2F1-203ENST00000594213 INE1O15225 51 aa3.49□□□□□ -1.85
GTF2F1-203ENST00000594213 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
GTF2F1-203ENST00000594213 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
GTF2F1-203ENST00000594213 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
GTF2F1-203ENST00000594213 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
GTF2F1-203ENST00000594213 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
GTF2F1-203ENST00000594213 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
GTF2F1-203ENST00000594213 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
GTF2F1-203ENST00000594213 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
GTF2F1-203ENST00000594213 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
GTF2F1-203ENST00000594213 PRM1P04553 51 aa2.38□□□□□ -2.03
GTF2F1-203ENST00000594213 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 200.7 ms