RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 A8MU10 97 aa5.5□□□□□ -1.53
LIG1-205ENST00000593425 TNP1P09430 55 aa5.5□□□□□ -1.53
LIG1-205ENST00000593425 SMIM26A0A096LP01 95 aa5.47□□□□□ -1.53
LIG1-205ENST00000593425 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
LIG1-205ENST00000593425 A0A1B0GU69 56 aa5.4□□□□□ -1.54
LIG1-205ENST00000593425 KRTAP5-5Q701N2 237 aaPredicted RBP5.4□□□□□ -1.54
LIG1-205ENST00000593425 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
LIG1-205ENST00000593425 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
LIG1-205ENST00000593425 H7BZZ5 65 aa5.36□□□□□ -1.55
LIG1-205ENST00000593425 COX7CP15954 63 aa5.34□□□□□ -1.55
LIG1-205ENST00000593425 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.56
LIG1-205ENST00000593425 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
LIG1-205ENST00000593425 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
LIG1-205ENST00000593425 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
LIG1-205ENST00000593425 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
LIG1-205ENST00000593425 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
LIG1-205ENST00000593425 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
LIG1-205ENST00000593425 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
LIG1-205ENST00000593425 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
LIG1-205ENST00000593425 UQCR11O14957 56 aa4.95□□□□□ -1.62
LIG1-205ENST00000593425 ANAPC13Q9BS18 74 aa4.94□□□□□ -1.62
LIG1-205ENST00000593425 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
LIG1-205ENST00000593425 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
LIG1-205ENST00000593425 MT1AP04731 61 aa4.92□□□□□ -1.62
LIG1-205ENST00000593425 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
LIG1-205ENST00000593425 CCDC179H3BU77 68 aa4.91□□□□□ -1.62
LIG1-205ENST00000593425 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
LIG1-205ENST00000593425 ATP5EP56381 51 aaPredicted RBP4.9□□□□□ -1.63
LIG1-205ENST00000593425 MUC5ACP98088 5654 aa4.84□□□□□ -1.64
LIG1-205ENST00000593425 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
LIG1-205ENST00000593425 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
LIG1-205ENST00000593425 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
LIG1-205ENST00000593425 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
LIG1-205ENST00000593425 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
LIG1-205ENST00000593425 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
LIG1-205ENST00000593425 K7ERS5 55 aa4.75□□□□□ -1.65
LIG1-205ENST00000593425 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
LIG1-205ENST00000593425 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
LIG1-205ENST00000593425 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
LIG1-205ENST00000593425 TMEM258P61165 79 aa4.65□□□□□ -1.67
LIG1-205ENST00000593425 PSPHP1O15172 72 aa4.56□□□□□ -1.68
LIG1-205ENST00000593425 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
LIG1-205ENST00000593425 MT3P25713 68 aa4.49□□□□□ -1.69
LIG1-205ENST00000593425 Q1T7F1 81 aa4.48□□□□□ -1.69
LIG1-205ENST00000593425 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
LIG1-205ENST00000593425 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
LIG1-205ENST00000593425 V9GYY9 64 aa4.45□□□□□ -1.7
LIG1-205ENST00000593425 ROMO1P60602 79 aa4.4□□□□□ -1.71
LIG1-205ENST00000593425 A6NED7 52 aa4.36□□□□□ -1.71
LIG1-205ENST00000593425 H3BS24 57 aa4.29□□□□□ -1.72
LIG1-205ENST00000593425 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
LIG1-205ENST00000593425 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
LIG1-205ENST00000593425 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
LIG1-205ENST00000593425 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
LIG1-205ENST00000593425 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
LIG1-205ENST00000593425 SVIPQ8NHG7 77 aa3.61□□□□□ -1.83
LIG1-205ENST00000593425 PCP4P48539 62 aa3.57□□□□□ -1.84
LIG1-205ENST00000593425 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
LIG1-205ENST00000593425 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
LIG1-205ENST00000593425 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
LIG1-205ENST00000593425 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
LIG1-205ENST00000593425 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
LIG1-205ENST00000593425 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
LIG1-205ENST00000593425 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
LIG1-205ENST00000593425 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
LIG1-205ENST00000593425 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
LIG1-205ENST00000593425 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
LIG1-205ENST00000593425 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
LIG1-205ENST00000593425 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
LIG1-205ENST00000593425 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
LIG1-205ENST00000593425 PRO0628Q9UI54 55 aa2.88□□□□□ -1.95
LIG1-205ENST00000593425 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
LIG1-205ENST00000593425 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
LIG1-205ENST00000593425 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
LIG1-205ENST00000593425 NDUFAF8A1L188 74 aa2.31□□□□□ -2.04
LIG1-205ENST00000593425 PRM1P04553 51 aa2.26□□□□□ -2.05
LIG1-205ENST00000593425 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
LIG1-205ENST00000593425 INE1O15225 51 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 202.2 ms