RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 K7ERS5 55 aa5.08□□□□□ -1.6
APOC1-208ENST00000592535 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
APOC1-208ENST00000592535 MT1GP13640 62 aa5□□□□□ -1.61
APOC1-208ENST00000592535 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
APOC1-208ENST00000592535 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
APOC1-208ENST00000592535 TNP1P09430 55 aa4.95□□□□□ -1.62
APOC1-208ENST00000592535 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
APOC1-208ENST00000592535 MT1LQ93083 61 aa4.95□□□□□ -1.62
APOC1-208ENST00000592535 PRO0628Q9UI54 55 aa4.95□□□□□ -1.62
APOC1-208ENST00000592535 MT1MQ8N339 61 aa4.93□□□□□ -1.62
APOC1-208ENST00000592535 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
APOC1-208ENST00000592535 ROMO1P60602 79 aa4.9□□□□□ -1.63
APOC1-208ENST00000592535 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
APOC1-208ENST00000592535 PMAIP1Q13794 54 aa4.86□□□□□ -1.63
APOC1-208ENST00000592535 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
APOC1-208ENST00000592535 KRTAP25-1Q3LHN0 102 aa4.83□□□□□ -1.64
APOC1-208ENST00000592535 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
APOC1-208ENST00000592535 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
APOC1-208ENST00000592535 MT4P47944 62 aa4.76□□□□□ -1.65
APOC1-208ENST00000592535 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
APOC1-208ENST00000592535 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
APOC1-208ENST00000592535 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
APOC1-208ENST00000592535 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
APOC1-208ENST00000592535 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
APOC1-208ENST00000592535 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
APOC1-208ENST00000592535 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
APOC1-208ENST00000592535 PRAC1Q96KF2 57 aa4.56□□□□□ -1.68
APOC1-208ENST00000592535 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
APOC1-208ENST00000592535 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
APOC1-208ENST00000592535 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
APOC1-208ENST00000592535 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
APOC1-208ENST00000592535 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
APOC1-208ENST00000592535 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
APOC1-208ENST00000592535 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
APOC1-208ENST00000592535 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
APOC1-208ENST00000592535 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
APOC1-208ENST00000592535 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
APOC1-208ENST00000592535 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
APOC1-208ENST00000592535 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
APOC1-208ENST00000592535 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
APOC1-208ENST00000592535 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
APOC1-208ENST00000592535 MT1AP04731 61 aa4.21□□□□□ -1.74
APOC1-208ENST00000592535 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
APOC1-208ENST00000592535 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
APOC1-208ENST00000592535 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
APOC1-208ENST00000592535 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
APOC1-208ENST00000592535 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
APOC1-208ENST00000592535 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
APOC1-208ENST00000592535 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
APOC1-208ENST00000592535 MT3P25713 68 aa3.83□□□□□ -1.8
APOC1-208ENST00000592535 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
APOC1-208ENST00000592535 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
APOC1-208ENST00000592535 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
APOC1-208ENST00000592535 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
APOC1-208ENST00000592535 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
APOC1-208ENST00000592535 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
APOC1-208ENST00000592535 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
APOC1-208ENST00000592535 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
APOC1-208ENST00000592535 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
APOC1-208ENST00000592535 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
APOC1-208ENST00000592535 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
APOC1-208ENST00000592535 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
APOC1-208ENST00000592535 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
APOC1-208ENST00000592535 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
APOC1-208ENST00000592535 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
APOC1-208ENST00000592535 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
APOC1-208ENST00000592535 H3BS24 57 aa2.97□□□□□ -1.93
APOC1-208ENST00000592535 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
APOC1-208ENST00000592535 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
APOC1-208ENST00000592535 INE1O15225 51 aa2.92□□□□□ -1.94
APOC1-208ENST00000592535 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
APOC1-208ENST00000592535 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
APOC1-208ENST00000592535 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
APOC1-208ENST00000592535 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
APOC1-208ENST00000592535 PRM1P04553 51 aa2.52□□□□□ -2.01
APOC1-208ENST00000592535 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
APOC1-208ENST00000592535 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
APOC1-208ENST00000592535 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms