RNA–Protein interactions for RNA: ENST00000592235.1

NCLN-207, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 380 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-207ENST00000592235 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
NCLN-207ENST00000592235 KRTAP19-3Q7Z4W3 81 aa6.31□□□□□ -1.4
NCLN-207ENST00000592235 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
NCLN-207ENST00000592235 ROMO1P60602 79 aa6.23□□□□□ -1.41
NCLN-207ENST00000592235 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
NCLN-207ENST00000592235 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
NCLN-207ENST00000592235 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
NCLN-207ENST00000592235 MT1GP13640 62 aa6.16□□□□□ -1.42
NCLN-207ENST00000592235 GPR98Q8WXG9 6306 aa6.16□□□□□ -1.42
NCLN-207ENST00000592235 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
NCLN-207ENST00000592235 KRTAP4-9Q9BYQ8 210 aa6.11□□□□□ -1.43
NCLN-207ENST00000592235 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
NCLN-207ENST00000592235 MT1MQ8N339 61 aa6.03□□□□□ -1.44
NCLN-207ENST00000592235 MT1LQ93083 61 aa6.02□□□□□ -1.45
NCLN-207ENST00000592235 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
NCLN-207ENST00000592235 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
NCLN-207ENST00000592235 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
NCLN-207ENST00000592235 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
NCLN-207ENST00000592235 PMAIP1Q13794 54 aa5.91□□□□□ -1.46
NCLN-207ENST00000592235 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
NCLN-207ENST00000592235 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
NCLN-207ENST00000592235 MT4P47944 62 aa5.86□□□□□ -1.47
NCLN-207ENST00000592235 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
NCLN-207ENST00000592235 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
NCLN-207ENST00000592235 AHNAK2Q8IVF2 5795 aa5.78□□□□□ -1.48
NCLN-207ENST00000592235 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
NCLN-207ENST00000592235 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
NCLN-207ENST00000592235 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
NCLN-207ENST00000592235 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
NCLN-207ENST00000592235 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
NCLN-207ENST00000592235 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
NCLN-207ENST00000592235 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
NCLN-207ENST00000592235 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
NCLN-207ENST00000592235 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
NCLN-207ENST00000592235 KTN1-AS1Q86SY8 53 aa5.49□□□□□ -1.53
NCLN-207ENST00000592235 KRTAP5-7Q6L8G8 165 aa5.48□□□□□ -1.53
NCLN-207ENST00000592235 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
NCLN-207ENST00000592235 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
NCLN-207ENST00000592235 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
NCLN-207ENST00000592235 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
NCLN-207ENST00000592235 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
NCLN-207ENST00000592235 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
NCLN-207ENST00000592235 MT1AP04731 61 aa5.13□□□□□ -1.59
NCLN-207ENST00000592235 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
NCLN-207ENST00000592235 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
NCLN-207ENST00000592235 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
NCLN-207ENST00000592235 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
NCLN-207ENST00000592235 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
NCLN-207ENST00000592235 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
NCLN-207ENST00000592235 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
NCLN-207ENST00000592235 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
NCLN-207ENST00000592235 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
NCLN-207ENST00000592235 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
NCLN-207ENST00000592235 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
NCLN-207ENST00000592235 MT3P25713 68 aa4.69□□□□□ -1.66
NCLN-207ENST00000592235 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
NCLN-207ENST00000592235 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
NCLN-207ENST00000592235 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
NCLN-207ENST00000592235 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
NCLN-207ENST00000592235 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
NCLN-207ENST00000592235 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
NCLN-207ENST00000592235 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
NCLN-207ENST00000592235 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
NCLN-207ENST00000592235 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
NCLN-207ENST00000592235 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
NCLN-207ENST00000592235 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
NCLN-207ENST00000592235 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
NCLN-207ENST00000592235 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
NCLN-207ENST00000592235 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
NCLN-207ENST00000592235 INE1O15225 51 aa3.49□□□□□ -1.85
NCLN-207ENST00000592235 H3BS24 57 aa3.41□□□□□ -1.86
NCLN-207ENST00000592235 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
NCLN-207ENST00000592235 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
NCLN-207ENST00000592235 PRM1P04553 51 aa3.16□□□□□ -1.9
NCLN-207ENST00000592235 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
NCLN-207ENST00000592235 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
NCLN-207ENST00000592235 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
NCLN-207ENST00000592235 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 90.6 ms