RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 UQCR11O14957 56 aa6.58□□□□□ -1.36
CIRBP-237ENST00000592234 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
CIRBP-237ENST00000592234 C10orf95Q9H7T3 257 aa6.58□□□□□ -1.36
CIRBP-237ENST00000592234 MT1MQ8N339 61 aa6.54□□□□□ -1.36
CIRBP-237ENST00000592234 TNP1P09430 55 aa6.52□□□□□ -1.37
CIRBP-237ENST00000592234 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
CIRBP-237ENST00000592234 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
CIRBP-237ENST00000592234 MT1LQ93083 61 aa6.51□□□□□ -1.37
CIRBP-237ENST00000592234 MIR22HGQ0VDD5 57 aa6.5□□□□□ -1.37
CIRBP-237ENST00000592234 MT4P47944 62 aa6.49□□□□□ -1.37
CIRBP-237ENST00000592234 A6NED7 52 aa6.48□□□□□ -1.37
CIRBP-237ENST00000592234 HMCN1Q96RW7 5635 aa6.44□□□□□ -1.38
CIRBP-237ENST00000592234 KRTAP4-3Q9BYR4 195 aa6.39□□□□□ -1.39
CIRBP-237ENST00000592234 KRTAP5-4Q6L8H1 288 aa6.34□□□□□ -1.39
CIRBP-237ENST00000592234 K7ERS5 55 aa6.3□□□□□ -1.4
CIRBP-237ENST00000592234 AHNAK2Q8IVF2 5795 aa6.27□□□□□ -1.41
CIRBP-237ENST00000592234 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
CIRBP-237ENST00000592234 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
CIRBP-237ENST00000592234 CDC42SE1Q9NRR8 79 aa6.23□□□□□ -1.41
CIRBP-237ENST00000592234 KRTAP5-10Q6L8G5 202 aa6.2□□□□□ -1.42
CIRBP-237ENST00000592234 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
CIRBP-237ENST00000592234 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
CIRBP-237ENST00000592234 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
CIRBP-237ENST00000592234 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
CIRBP-237ENST00000592234 KRTAP20-2Q3LI61 65 aa6.01□□□□□ -1.45
CIRBP-237ENST00000592234 KRTAP5-7Q6L8G8 165 aa5.99□□□□□ -1.45
CIRBP-237ENST00000592234 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
CIRBP-237ENST00000592234 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
CIRBP-237ENST00000592234 ROMO1P60602 79 aa5.94□□□□□ -1.46
CIRBP-237ENST00000592234 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
CIRBP-237ENST00000592234 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
CIRBP-237ENST00000592234 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
CIRBP-237ENST00000592234 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
CIRBP-237ENST00000592234 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
CIRBP-237ENST00000592234 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
CIRBP-237ENST00000592234 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
CIRBP-237ENST00000592234 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
CIRBP-237ENST00000592234 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
CIRBP-237ENST00000592234 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
CIRBP-237ENST00000592234 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
CIRBP-237ENST00000592234 MT1AP04731 61 aa5.53□□□□□ -1.52
CIRBP-237ENST00000592234 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
CIRBP-237ENST00000592234 KRTAP5-2Q701N4 177 aa5.51□□□□□ -1.53
CIRBP-237ENST00000592234 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
CIRBP-237ENST00000592234 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
CIRBP-237ENST00000592234 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
CIRBP-237ENST00000592234 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
CIRBP-237ENST00000592234 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
CIRBP-237ENST00000592234 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
CIRBP-237ENST00000592234 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
CIRBP-237ENST00000592234 MUC5BQ9HC84 5762 aaPredicted RBP5.19□□□□□ -1.58
CIRBP-237ENST00000592234 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
CIRBP-237ENST00000592234 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
CIRBP-237ENST00000592234 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
CIRBP-237ENST00000592234 MT3P25713 68 aa5.08□□□□□ -1.6
CIRBP-237ENST00000592234 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
CIRBP-237ENST00000592234 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
CIRBP-237ENST00000592234 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
CIRBP-237ENST00000592234 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
CIRBP-237ENST00000592234 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
CIRBP-237ENST00000592234 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
CIRBP-237ENST00000592234 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
CIRBP-237ENST00000592234 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CIRBP-237ENST00000592234 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
CIRBP-237ENST00000592234 H3BS24 57 aa3.99□□□□□ -1.77
CIRBP-237ENST00000592234 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
CIRBP-237ENST00000592234 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
CIRBP-237ENST00000592234 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
CIRBP-237ENST00000592234 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
CIRBP-237ENST00000592234 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
CIRBP-237ENST00000592234 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
CIRBP-237ENST00000592234 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
CIRBP-237ENST00000592234 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
CIRBP-237ENST00000592234 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
CIRBP-237ENST00000592234 INE1O15225 51 aa3.26□□□□□ -1.89
CIRBP-237ENST00000592234 PRM1P04553 51 aa3.11□□□□□ -1.91
CIRBP-237ENST00000592234 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
CIRBP-237ENST00000592234 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 87.2 ms