RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
BRCA1-226ENST00000591534 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
BRCA1-226ENST00000591534 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
BRCA1-226ENST00000591534 P0C880 135 aa4.06□□□□□ -1.76
BRCA1-226ENST00000591534 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
BRCA1-226ENST00000591534 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
BRCA1-226ENST00000591534 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
BRCA1-226ENST00000591534 SPRR2EP22531 72 aa4.01□□□□□ -1.77
BRCA1-226ENST00000591534 SPRR2BP35325 72 aa4.01□□□□□ -1.77
BRCA1-226ENST00000591534 SPRR2AP35326 72 aa4.01□□□□□ -1.77
BRCA1-226ENST00000591534 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
BRCA1-226ENST00000591534 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
BRCA1-226ENST00000591534 LINC01554Q52M75 96 aa3.96□□□□□ -1.78
BRCA1-226ENST00000591534 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
BRCA1-226ENST00000591534 A0A0D9SG42 100 aa3.93□□□□□ -1.78
BRCA1-226ENST00000591534 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
BRCA1-226ENST00000591534 MT1XP80297 61 aa3.92□□□□□ -1.78
BRCA1-226ENST00000591534 A8MU10 97 aa3.91□□□□□ -1.78
BRCA1-226ENST00000591534 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
BRCA1-226ENST00000591534 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
BRCA1-226ENST00000591534 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
BRCA1-226ENST00000591534 SPRR2DP22532 72 aa3.89□□□□□ -1.79
BRCA1-226ENST00000591534 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
BRCA1-226ENST00000591534 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
BRCA1-226ENST00000591534 KRTAP12-1P59990 96 aa3.85□□□□□ -1.79
BRCA1-226ENST00000591534 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
BRCA1-226ENST00000591534 ROMO1P60602 79 aa3.78□□□□□ -1.8
BRCA1-226ENST00000591534 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
BRCA1-226ENST00000591534 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
BRCA1-226ENST00000591534 TNP1P09430 55 aa3.72□□□□□ -1.81
BRCA1-226ENST00000591534 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
BRCA1-226ENST00000591534 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
BRCA1-226ENST00000591534 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
BRCA1-226ENST00000591534 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
BRCA1-226ENST00000591534 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
BRCA1-226ENST00000591534 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
BRCA1-226ENST00000591534 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
BRCA1-226ENST00000591534 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
BRCA1-226ENST00000591534 MT1EP04732 61 aa3.5□□□□□ -1.85
BRCA1-226ENST00000591534 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
BRCA1-226ENST00000591534 MT1GP13640 62 aa3.45□□□□□ -1.86
BRCA1-226ENST00000591534 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
BRCA1-226ENST00000591534 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
BRCA1-226ENST00000591534 MT4P47944 62 aa3.39□□□□□ -1.87
BRCA1-226ENST00000591534 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
BRCA1-226ENST00000591534 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
BRCA1-226ENST00000591534 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
BRCA1-226ENST00000591534 MT1MQ8N339 61 aa3.34□□□□□ -1.87
BRCA1-226ENST00000591534 MT1LQ93083 61 aa3.32□□□□□ -1.88
BRCA1-226ENST00000591534 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
BRCA1-226ENST00000591534 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
BRCA1-226ENST00000591534 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
BRCA1-226ENST00000591534 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
BRCA1-226ENST00000591534 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
BRCA1-226ENST00000591534 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
BRCA1-226ENST00000591534 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
BRCA1-226ENST00000591534 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
BRCA1-226ENST00000591534 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
BRCA1-226ENST00000591534 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
BRCA1-226ENST00000591534 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-226ENST00000591534 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
BRCA1-226ENST00000591534 MT1AP04731 61 aa2.83□□□□□ -1.96
BRCA1-226ENST00000591534 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
BRCA1-226ENST00000591534 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
BRCA1-226ENST00000591534 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
BRCA1-226ENST00000591534 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-226ENST00000591534 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
BRCA1-226ENST00000591534 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
BRCA1-226ENST00000591534 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
BRCA1-226ENST00000591534 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
BRCA1-226ENST00000591534 INE1O15225 51 aa2.48□□□□□ -2.01
BRCA1-226ENST00000591534 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
BRCA1-226ENST00000591534 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
BRCA1-226ENST00000591534 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
BRCA1-226ENST00000591534 PRM1P04553 51 aa1.88□□□□□ -2.11
BRCA1-226ENST00000591534 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
BRCA1-226ENST00000591534 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms