RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
TPM4-213ENST00000591226 FSIP2Q5CZC0 6907 aa4.21□□□□□ -1.73
TPM4-213ENST00000591226 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
TPM4-213ENST00000591226 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
TPM4-213ENST00000591226 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.74
TPM4-213ENST00000591226 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
TPM4-213ENST00000591226 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
TPM4-213ENST00000591226 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.75
TPM4-213ENST00000591226 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
TPM4-213ENST00000591226 MT3P25713 68 aa4.06□□□□□ -1.76
TPM4-213ENST00000591226 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
TPM4-213ENST00000591226 MT1EP04732 61 aa4.04□□□□□ -1.76
TPM4-213ENST00000591226 LCE3BQ5TA77 95 aa4.02□□□□□ -1.77
TPM4-213ENST00000591226 MT1LQ93083 61 aa3.99□□□□□ -1.77
TPM4-213ENST00000591226 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
TPM4-213ENST00000591226 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
TPM4-213ENST00000591226 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
TPM4-213ENST00000591226 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
TPM4-213ENST00000591226 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.8
TPM4-213ENST00000591226 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
TPM4-213ENST00000591226 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
TPM4-213ENST00000591226 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
TPM4-213ENST00000591226 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
TPM4-213ENST00000591226 MT1GP13640 62 aa3.79□□□□□ -1.8
TPM4-213ENST00000591226 MT1MQ8N339 61 aa3.79□□□□□ -1.8
TPM4-213ENST00000591226 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
TPM4-213ENST00000591226 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
TPM4-213ENST00000591226 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
TPM4-213ENST00000591226 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
TPM4-213ENST00000591226 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
TPM4-213ENST00000591226 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
TPM4-213ENST00000591226 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
TPM4-213ENST00000591226 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
TPM4-213ENST00000591226 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
TPM4-213ENST00000591226 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
TPM4-213ENST00000591226 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
TPM4-213ENST00000591226 SPRR2EP22531 72 aa3.57□□□□□ -1.84
TPM4-213ENST00000591226 SPRR2BP35325 72 aa3.57□□□□□ -1.84
TPM4-213ENST00000591226 SPRR2AP35326 72 aa3.57□□□□□ -1.84
TPM4-213ENST00000591226 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
TPM4-213ENST00000591226 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
TPM4-213ENST00000591226 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
TPM4-213ENST00000591226 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
TPM4-213ENST00000591226 SPRR2DP22532 72 aa3.42□□□□□ -1.86
TPM4-213ENST00000591226 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
TPM4-213ENST00000591226 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
TPM4-213ENST00000591226 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
TPM4-213ENST00000591226 MT1AP04731 61 aa3.37□□□□□ -1.87
TPM4-213ENST00000591226 NEBP20929 6669 aa3.27□□□□□ -1.89
TPM4-213ENST00000591226 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
TPM4-213ENST00000591226 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
TPM4-213ENST00000591226 PRM1P04553 51 aa3.09□□□□□ -1.91
TPM4-213ENST00000591226 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
TPM4-213ENST00000591226 MT4P47944 62 aa3□□□□□ -1.93
TPM4-213ENST00000591226 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
TPM4-213ENST00000591226 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
TPM4-213ENST00000591226 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
TPM4-213ENST00000591226 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
TPM4-213ENST00000591226 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
TPM4-213ENST00000591226 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
TPM4-213ENST00000591226 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
TPM4-213ENST00000591226 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
TPM4-213ENST00000591226 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
TPM4-213ENST00000591226 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.01
TPM4-213ENST00000591226 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
TPM4-213ENST00000591226 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
TPM4-213ENST00000591226 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
TPM4-213ENST00000591226 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
TPM4-213ENST00000591226 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
TPM4-213ENST00000591226 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
TPM4-213ENST00000591226 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
TPM4-213ENST00000591226 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
TPM4-213ENST00000591226 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
TPM4-213ENST00000591226 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
TPM4-213ENST00000591226 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
TPM4-213ENST00000591226 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
TPM4-213ENST00000591226 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
TPM4-213ENST00000591226 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 188.7 ms