RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 K7ERS5 55 aa4.4□□□□□ -1.71
CTDP1-206ENST00000590635 Q1T7F1 81 aa4.39□□□□□ -1.71
CTDP1-206ENST00000590635 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
CTDP1-206ENST00000590635 PSPHP1O15172 72 aa4.34□□□□□ -1.71
CTDP1-206ENST00000590635 MT1LQ93083 61 aa4.32□□□□□ -1.72
CTDP1-206ENST00000590635 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
CTDP1-206ENST00000590635 MT1MQ8N339 61 aa4.29□□□□□ -1.72
CTDP1-206ENST00000590635 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
CTDP1-206ENST00000590635 A6NED7 52 aa4.24□□□□□ -1.73
CTDP1-206ENST00000590635 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
CTDP1-206ENST00000590635 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
CTDP1-206ENST00000590635 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
CTDP1-206ENST00000590635 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
CTDP1-206ENST00000590635 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
CTDP1-206ENST00000590635 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
CTDP1-206ENST00000590635 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
CTDP1-206ENST00000590635 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
CTDP1-206ENST00000590635 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
CTDP1-206ENST00000590635 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
CTDP1-206ENST00000590635 MT4P47944 62 aa4.05□□□□□ -1.76
CTDP1-206ENST00000590635 ROMO1P60602 79 aa4.05□□□□□ -1.76
CTDP1-206ENST00000590635 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
CTDP1-206ENST00000590635 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
CTDP1-206ENST00000590635 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
CTDP1-206ENST00000590635 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
CTDP1-206ENST00000590635 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
CTDP1-206ENST00000590635 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
CTDP1-206ENST00000590635 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
CTDP1-206ENST00000590635 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
CTDP1-206ENST00000590635 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
CTDP1-206ENST00000590635 LOC100996750A0A140TA64 210 aa3.85□□□□□ -1.79
CTDP1-206ENST00000590635 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
CTDP1-206ENST00000590635 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
CTDP1-206ENST00000590635 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
CTDP1-206ENST00000590635 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
CTDP1-206ENST00000590635 MT1AP04731 61 aa3.7□□□□□ -1.82
CTDP1-206ENST00000590635 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
CTDP1-206ENST00000590635 BRK1Q8WUW1 75 aa3.69□□□□□ -1.82
CTDP1-206ENST00000590635 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
CTDP1-206ENST00000590635 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
CTDP1-206ENST00000590635 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
CTDP1-206ENST00000590635 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
CTDP1-206ENST00000590635 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
CTDP1-206ENST00000590635 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
CTDP1-206ENST00000590635 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
CTDP1-206ENST00000590635 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
CTDP1-206ENST00000590635 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
CTDP1-206ENST00000590635 MT3P25713 68 aa3.42□□□□□ -1.86
CTDP1-206ENST00000590635 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
CTDP1-206ENST00000590635 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
CTDP1-206ENST00000590635 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
CTDP1-206ENST00000590635 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
CTDP1-206ENST00000590635 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
CTDP1-206ENST00000590635 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
CTDP1-206ENST00000590635 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
CTDP1-206ENST00000590635 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CTDP1-206ENST00000590635 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
CTDP1-206ENST00000590635 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
CTDP1-206ENST00000590635 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
CTDP1-206ENST00000590635 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
CTDP1-206ENST00000590635 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
CTDP1-206ENST00000590635 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
CTDP1-206ENST00000590635 H3BS24 57 aa2.82□□□□□ -1.96
CTDP1-206ENST00000590635 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
CTDP1-206ENST00000590635 A0A0A0MQY5 61 aa2.71□□□□□ -1.98
CTDP1-206ENST00000590635 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
CTDP1-206ENST00000590635 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
CTDP1-206ENST00000590635 NDUFAF8A1L188 74 aa2.58□□□□□ -2
CTDP1-206ENST00000590635 LCE1FQ5T754 118 aa2.56□□□□□ -2
CTDP1-206ENST00000590635 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
CTDP1-206ENST00000590635 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
CTDP1-206ENST00000590635 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
CTDP1-206ENST00000590635 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
CTDP1-206ENST00000590635 INE1O15225 51 aa2.1□□□□□ -2.07
CTDP1-206ENST00000590635 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
CTDP1-206ENST00000590635 PRM1P04553 51 aa2.04□□□□□ -2.08
CTDP1-206ENST00000590635 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
CTDP1-206ENST00000590635 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms