RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
GCDH-213ENST00000590627 PMAIP1Q13794 54 aa6.34□□□□□ -1.39
GCDH-213ENST00000590627 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
GCDH-213ENST00000590627 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
GCDH-213ENST00000590627 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
GCDH-213ENST00000590627 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
GCDH-213ENST00000590627 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
GCDH-213ENST00000590627 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.43
GCDH-213ENST00000590627 MT1EP04732 61 aa6.08□□□□□ -1.44
GCDH-213ENST00000590627 GPR98Q8WXG9 6306 aa6.08□□□□□ -1.44
GCDH-213ENST00000590627 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
GCDH-213ENST00000590627 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
GCDH-213ENST00000590627 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
GCDH-213ENST00000590627 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
GCDH-213ENST00000590627 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
GCDH-213ENST00000590627 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
GCDH-213ENST00000590627 MT1LQ93083 61 aa5.92□□□□□ -1.46
GCDH-213ENST00000590627 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
GCDH-213ENST00000590627 MT1GP13640 62 aa5.85□□□□□ -1.47
GCDH-213ENST00000590627 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
GCDH-213ENST00000590627 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
GCDH-213ENST00000590627 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
GCDH-213ENST00000590627 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
GCDH-213ENST00000590627 MT1MQ8N339 61 aa5.74□□□□□ -1.49
GCDH-213ENST00000590627 MT4P47944 62 aa5.68□□□□□ -1.5
GCDH-213ENST00000590627 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
GCDH-213ENST00000590627 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
GCDH-213ENST00000590627 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
GCDH-213ENST00000590627 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
GCDH-213ENST00000590627 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
GCDH-213ENST00000590627 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
GCDH-213ENST00000590627 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
GCDH-213ENST00000590627 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
GCDH-213ENST00000590627 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
GCDH-213ENST00000590627 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
GCDH-213ENST00000590627 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
GCDH-213ENST00000590627 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
GCDH-213ENST00000590627 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
GCDH-213ENST00000590627 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
GCDH-213ENST00000590627 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
GCDH-213ENST00000590627 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
GCDH-213ENST00000590627 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
GCDH-213ENST00000590627 MT1AP04731 61 aa5.04□□□□□ -1.6
GCDH-213ENST00000590627 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
GCDH-213ENST00000590627 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
GCDH-213ENST00000590627 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
GCDH-213ENST00000590627 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
GCDH-213ENST00000590627 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
GCDH-213ENST00000590627 KRTAP5-8O75690 187 aa4.74□□□□□ -1.65
GCDH-213ENST00000590627 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
GCDH-213ENST00000590627 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
GCDH-213ENST00000590627 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
GCDH-213ENST00000590627 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
GCDH-213ENST00000590627 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
GCDH-213ENST00000590627 MT3P25713 68 aa4.58□□□□□ -1.68
GCDH-213ENST00000590627 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
GCDH-213ENST00000590627 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
GCDH-213ENST00000590627 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
GCDH-213ENST00000590627 H3BS24 57 aa4.3□□□□□ -1.72
GCDH-213ENST00000590627 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
GCDH-213ENST00000590627 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
GCDH-213ENST00000590627 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
GCDH-213ENST00000590627 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
GCDH-213ENST00000590627 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
GCDH-213ENST00000590627 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
GCDH-213ENST00000590627 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
GCDH-213ENST00000590627 INE1O15225 51 aa3.8□□□□□ -1.8
GCDH-213ENST00000590627 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
GCDH-213ENST00000590627 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
GCDH-213ENST00000590627 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
GCDH-213ENST00000590627 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
GCDH-213ENST00000590627 PRM1P04553 51 aa3.34□□□□□ -1.87
GCDH-213ENST00000590627 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
GCDH-213ENST00000590627 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
GCDH-213ENST00000590627 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
GCDH-213ENST00000590627 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
GCDH-213ENST00000590627 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
GCDH-213ENST00000590627 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 127.5 ms