RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
CAPNS1-209ENST00000590049 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
CAPNS1-209ENST00000590049 MT4P47944 62 aa4.86□□□□□ -1.63
CAPNS1-209ENST00000590049 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
CAPNS1-209ENST00000590049 KRTAP12-2P59991 146 aa4.83□□□□□ -1.64
CAPNS1-209ENST00000590049 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
CAPNS1-209ENST00000590049 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
CAPNS1-209ENST00000590049 AHNAKQ09666 5890 aaKnown RBP4.78□□□□□ -1.64
CAPNS1-209ENST00000590049 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
CAPNS1-209ENST00000590049 KRTAP4-8A0A0G2JLE6 195 aa4.69□□□□□ -1.66
CAPNS1-209ENST00000590049 MT1XP80297 61 aa4.69□□□□□ -1.66
CAPNS1-209ENST00000590049 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
CAPNS1-209ENST00000590049 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
CAPNS1-209ENST00000590049 H3BS24 57 aa4.61□□□□□ -1.67
CAPNS1-209ENST00000590049 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
CAPNS1-209ENST00000590049 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
CAPNS1-209ENST00000590049 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
CAPNS1-209ENST00000590049 TNP1P09430 55 aa4.58□□□□□ -1.68
CAPNS1-209ENST00000590049 ROMO1P60602 79 aa4.58□□□□□ -1.68
CAPNS1-209ENST00000590049 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
CAPNS1-209ENST00000590049 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
CAPNS1-209ENST00000590049 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
CAPNS1-209ENST00000590049 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
CAPNS1-209ENST00000590049 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
CAPNS1-209ENST00000590049 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
CAPNS1-209ENST00000590049 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
CAPNS1-209ENST00000590049 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
CAPNS1-209ENST00000590049 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
CAPNS1-209ENST00000590049 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
CAPNS1-209ENST00000590049 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
CAPNS1-209ENST00000590049 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
CAPNS1-209ENST00000590049 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
CAPNS1-209ENST00000590049 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
CAPNS1-209ENST00000590049 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
CAPNS1-209ENST00000590049 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
CAPNS1-209ENST00000590049 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
CAPNS1-209ENST00000590049 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
CAPNS1-209ENST00000590049 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
CAPNS1-209ENST00000590049 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
CAPNS1-209ENST00000590049 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
CAPNS1-209ENST00000590049 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
CAPNS1-209ENST00000590049 MT1EP04732 61 aa4.14□□□□□ -1.75
CAPNS1-209ENST00000590049 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
CAPNS1-209ENST00000590049 MT1GP13640 62 aa4.06□□□□□ -1.76
CAPNS1-209ENST00000590049 MT1LQ93083 61 aa4.03□□□□□ -1.76
CAPNS1-209ENST00000590049 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
CAPNS1-209ENST00000590049 MT1MQ8N339 61 aa3.96□□□□□ -1.78
CAPNS1-209ENST00000590049 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
CAPNS1-209ENST00000590049 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
CAPNS1-209ENST00000590049 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
CAPNS1-209ENST00000590049 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
CAPNS1-209ENST00000590049 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
CAPNS1-209ENST00000590049 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
CAPNS1-209ENST00000590049 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
CAPNS1-209ENST00000590049 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
CAPNS1-209ENST00000590049 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
CAPNS1-209ENST00000590049 MT1AP04731 61 aa3.45□□□□□ -1.86
CAPNS1-209ENST00000590049 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
CAPNS1-209ENST00000590049 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
CAPNS1-209ENST00000590049 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
CAPNS1-209ENST00000590049 MT3P25713 68 aa3.16□□□□□ -1.9
CAPNS1-209ENST00000590049 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
CAPNS1-209ENST00000590049 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
CAPNS1-209ENST00000590049 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
CAPNS1-209ENST00000590049 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
CAPNS1-209ENST00000590049 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
CAPNS1-209ENST00000590049 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
CAPNS1-209ENST00000590049 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CAPNS1-209ENST00000590049 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
CAPNS1-209ENST00000590049 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
CAPNS1-209ENST00000590049 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CAPNS1-209ENST00000590049 INE1O15225 51 aa2.75□□□□□ -1.97
CAPNS1-209ENST00000590049 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
CAPNS1-209ENST00000590049 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CAPNS1-209ENST00000590049 PRM1P04553 51 aa2.36□□□□□ -2.03
CAPNS1-209ENST00000590049 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
CAPNS1-209ENST00000590049 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
CAPNS1-209ENST00000590049 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms