RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
ACTN4-211ENST00000589528 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
ACTN4-211ENST00000589528 TMEM258P61165 79 aa5.2□□□□□ -1.58
ACTN4-211ENST00000589528 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
ACTN4-211ENST00000589528 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
ACTN4-211ENST00000589528 ATP5EP56381 51 aaPredicted RBP5.15□□□□□ -1.59
ACTN4-211ENST00000589528 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
ACTN4-211ENST00000589528 A0A1B0GU33 70 aa5.13□□□□□ -1.59
ACTN4-211ENST00000589528 TNP1P09430 55 aa5.09□□□□□ -1.59
ACTN4-211ENST00000589528 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
ACTN4-211ENST00000589528 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
ACTN4-211ENST00000589528 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
ACTN4-211ENST00000589528 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
ACTN4-211ENST00000589528 A0A1B0GU69 56 aa5.01□□□□□ -1.61
ACTN4-211ENST00000589528 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
ACTN4-211ENST00000589528 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
ACTN4-211ENST00000589528 A8MU10 97 aa4.93□□□□□ -1.62
ACTN4-211ENST00000589528 PRR15LQ9BU68 103 aa4.9□□□□□ -1.63
ACTN4-211ENST00000589528 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
ACTN4-211ENST00000589528 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
ACTN4-211ENST00000589528 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
ACTN4-211ENST00000589528 Q1T7F1 81 aa4.83□□□□□ -1.64
ACTN4-211ENST00000589528 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
ACTN4-211ENST00000589528 V9GYY9 64 aa4.8□□□□□ -1.64
ACTN4-211ENST00000589528 UQCR11O14957 56 aa4.75□□□□□ -1.65
ACTN4-211ENST00000589528 AHNAKQ09666 5890 aaKnown RBP4.68□□□□□ -1.66
ACTN4-211ENST00000589528 PSPHP1O15172 72 aa4.67□□□□□ -1.66
ACTN4-211ENST00000589528 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
ACTN4-211ENST00000589528 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
ACTN4-211ENST00000589528 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
ACTN4-211ENST00000589528 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
ACTN4-211ENST00000589528 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
ACTN4-211ENST00000589528 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
ACTN4-211ENST00000589528 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
ACTN4-211ENST00000589528 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
ACTN4-211ENST00000589528 MT1AP04731 61 aa4.56□□□□□ -1.68
ACTN4-211ENST00000589528 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
ACTN4-211ENST00000589528 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
ACTN4-211ENST00000589528 A6NED7 52 aa4.53□□□□□ -1.68
ACTN4-211ENST00000589528 K7ERS5 55 aa4.53□□□□□ -1.68
ACTN4-211ENST00000589528 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
ACTN4-211ENST00000589528 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
ACTN4-211ENST00000589528 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
ACTN4-211ENST00000589528 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
ACTN4-211ENST00000589528 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
ACTN4-211ENST00000589528 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
ACTN4-211ENST00000589528 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
ACTN4-211ENST00000589528 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
ACTN4-211ENST00000589528 ROMO1P60602 79 aa4.25□□□□□ -1.73
ACTN4-211ENST00000589528 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
ACTN4-211ENST00000589528 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
ACTN4-211ENST00000589528 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
ACTN4-211ENST00000589528 MT3P25713 68 aa4.22□□□□□ -1.73
ACTN4-211ENST00000589528 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
ACTN4-211ENST00000589528 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
ACTN4-211ENST00000589528 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
ACTN4-211ENST00000589528 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
ACTN4-211ENST00000589528 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
ACTN4-211ENST00000589528 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
ACTN4-211ENST00000589528 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
ACTN4-211ENST00000589528 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
ACTN4-211ENST00000589528 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
ACTN4-211ENST00000589528 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
ACTN4-211ENST00000589528 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
ACTN4-211ENST00000589528 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
ACTN4-211ENST00000589528 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
ACTN4-211ENST00000589528 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
ACTN4-211ENST00000589528 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
ACTN4-211ENST00000589528 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
ACTN4-211ENST00000589528 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
ACTN4-211ENST00000589528 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
ACTN4-211ENST00000589528 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
ACTN4-211ENST00000589528 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
ACTN4-211ENST00000589528 H3BS24 57 aa2.69□□□□□ -1.98
ACTN4-211ENST00000589528 INE1O15225 51 aa2.64□□□□□ -1.99
ACTN4-211ENST00000589528 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
ACTN4-211ENST00000589528 PRM1P04553 51 aa2.17□□□□□ -2.06
ACTN4-211ENST00000589528 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms