RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 KRTAP25-1Q3LHN0 102 aa5.86□□□□□ -1.47
RPRD1A-208ENST00000589050 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
RPRD1A-208ENST00000589050 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
RPRD1A-208ENST00000589050 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
RPRD1A-208ENST00000589050 ROMO1P60602 79 aa5.81□□□□□ -1.48
RPRD1A-208ENST00000589050 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
RPRD1A-208ENST00000589050 MUC12Q9UKN1 5478 aa5.77□□□□□ -1.49
RPRD1A-208ENST00000589050 SPRR2EP22531 72 aa5.76□□□□□ -1.49
RPRD1A-208ENST00000589050 SPRR2BP35325 72 aa5.76□□□□□ -1.49
RPRD1A-208ENST00000589050 SPRR2AP35326 72 aa5.76□□□□□ -1.49
RPRD1A-208ENST00000589050 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
RPRD1A-208ENST00000589050 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
RPRD1A-208ENST00000589050 MT1EP04732 61 aa5.71□□□□□ -1.5
RPRD1A-208ENST00000589050 MDN1Q9NU22 5596 aa5.7□□□□□ -1.5
RPRD1A-208ENST00000589050 NEBP20929 6669 aa5.67□□□□□ -1.5
RPRD1A-208ENST00000589050 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
RPRD1A-208ENST00000589050 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
RPRD1A-208ENST00000589050 SPRR2DP22532 72 aa5.56□□□□□ -1.52
RPRD1A-208ENST00000589050 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
RPRD1A-208ENST00000589050 PMAIP1Q13794 54 aa5.53□□□□□ -1.52
RPRD1A-208ENST00000589050 MT1LQ93083 61 aa5.53□□□□□ -1.52
RPRD1A-208ENST00000589050 MT1GP13640 62 aa5.49□□□□□ -1.53
RPRD1A-208ENST00000589050 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
RPRD1A-208ENST00000589050 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
RPRD1A-208ENST00000589050 KRTAP2-3P0C7H8 128 aa5.43□□□□□ -1.54
RPRD1A-208ENST00000589050 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
RPRD1A-208ENST00000589050 MT1MQ8N339 61 aa5.41□□□□□ -1.54
RPRD1A-208ENST00000589050 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
RPRD1A-208ENST00000589050 KRTAP2-1Q9BYU5 128 aa5.29□□□□□ -1.56
RPRD1A-208ENST00000589050 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
RPRD1A-208ENST00000589050 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
RPRD1A-208ENST00000589050 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
RPRD1A-208ENST00000589050 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
RPRD1A-208ENST00000589050 KTN1-AS1Q86SY8 53 aa5.14□□□□□ -1.59
RPRD1A-208ENST00000589050 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
RPRD1A-208ENST00000589050 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
RPRD1A-208ENST00000589050 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
RPRD1A-208ENST00000589050 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
RPRD1A-208ENST00000589050 MT4P47944 62 aa4.83□□□□□ -1.64
RPRD1A-208ENST00000589050 A0A0A0MQY5 61 aa4.78□□□□□ -1.64
RPRD1A-208ENST00000589050 MT1AP04731 61 aa4.71□□□□□ -1.66
RPRD1A-208ENST00000589050 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
RPRD1A-208ENST00000589050 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
RPRD1A-208ENST00000589050 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
RPRD1A-208ENST00000589050 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
RPRD1A-208ENST00000589050 MT3P25713 68 aa4.63□□□□□ -1.67
RPRD1A-208ENST00000589050 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
RPRD1A-208ENST00000589050 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
RPRD1A-208ENST00000589050 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.61□□□□□ -1.67
RPRD1A-208ENST00000589050 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
RPRD1A-208ENST00000589050 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
RPRD1A-208ENST00000589050 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
RPRD1A-208ENST00000589050 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
RPRD1A-208ENST00000589050 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
RPRD1A-208ENST00000589050 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
RPRD1A-208ENST00000589050 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
RPRD1A-208ENST00000589050 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
RPRD1A-208ENST00000589050 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
RPRD1A-208ENST00000589050 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
RPRD1A-208ENST00000589050 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
RPRD1A-208ENST00000589050 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
RPRD1A-208ENST00000589050 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
RPRD1A-208ENST00000589050 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
RPRD1A-208ENST00000589050 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
RPRD1A-208ENST00000589050 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
RPRD1A-208ENST00000589050 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
RPRD1A-208ENST00000589050 MUC5ACP98088 5654 aa3.65□□□□□ -1.82
RPRD1A-208ENST00000589050 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
RPRD1A-208ENST00000589050 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
RPRD1A-208ENST00000589050 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
RPRD1A-208ENST00000589050 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
RPRD1A-208ENST00000589050 INE1O15225 51 aa3.2□□□□□ -1.9
RPRD1A-208ENST00000589050 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
RPRD1A-208ENST00000589050 PRM1P04553 51 aa3□□□□□ -1.93
RPRD1A-208ENST00000589050 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
RPRD1A-208ENST00000589050 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
RPRD1A-208ENST00000589050 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
RPRD1A-208ENST00000589050 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms