RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 KRTAP5-10Q6L8G5 202 aa6.14□□□□□ -1.43
SEC11C-205ENST00000588875 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
SEC11C-205ENST00000588875 SMIM26A0A096LP01 95 aa6.1□□□□□ -1.43
SEC11C-205ENST00000588875 MT1GP13640 62 aa6.05□□□□□ -1.44
SEC11C-205ENST00000588875 A8MU10 97 aa6.02□□□□□ -1.45
SEC11C-205ENST00000588875 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
SEC11C-205ENST00000588875 TMEM258P61165 79 aa5.98□□□□□ -1.45
SEC11C-205ENST00000588875 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
SEC11C-205ENST00000588875 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
SEC11C-205ENST00000588875 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
SEC11C-205ENST00000588875 KRTAP5-7Q6L8G8 165 aa5.96□□□□□ -1.46
SEC11C-205ENST00000588875 PP632Q6XCG6 107 aa5.96□□□□□ -1.46
SEC11C-205ENST00000588875 MT1MQ8N339 61 aa5.96□□□□□ -1.46
SEC11C-205ENST00000588875 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.46
SEC11C-205ENST00000588875 PCP4P48539 62 aa5.89□□□□□ -1.47
SEC11C-205ENST00000588875 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
SEC11C-205ENST00000588875 MT1LQ93083 61 aa5.86□□□□□ -1.47
SEC11C-205ENST00000588875 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
SEC11C-205ENST00000588875 TNP1P09430 55 aa5.84□□□□□ -1.47
SEC11C-205ENST00000588875 UQCR11O14957 56 aa5.82□□□□□ -1.48
SEC11C-205ENST00000588875 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
SEC11C-205ENST00000588875 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
SEC11C-205ENST00000588875 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
SEC11C-205ENST00000588875 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
SEC11C-205ENST00000588875 V9GYY9 64 aa5.65□□□□□ -1.5
SEC11C-205ENST00000588875 Q1T7F1 81 aa5.61□□□□□ -1.51
SEC11C-205ENST00000588875 PSPHP1O15172 72 aa5.59□□□□□ -1.51
SEC11C-205ENST00000588875 K7ERS5 55 aa5.57□□□□□ -1.52
SEC11C-205ENST00000588875 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
SEC11C-205ENST00000588875 KRTAP25-1Q3LHN0 102 aa5.55□□□□□ -1.52
SEC11C-205ENST00000588875 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
SEC11C-205ENST00000588875 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
SEC11C-205ENST00000588875 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
SEC11C-205ENST00000588875 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
SEC11C-205ENST00000588875 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
SEC11C-205ENST00000588875 A6NED7 52 aa5.42□□□□□ -1.54
SEC11C-205ENST00000588875 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
SEC11C-205ENST00000588875 AHNAKQ09666 5890 aaKnown RBP5.31□□□□□ -1.56
SEC11C-205ENST00000588875 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
SEC11C-205ENST00000588875 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
SEC11C-205ENST00000588875 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
SEC11C-205ENST00000588875 ROMO1P60602 79 aa5.2□□□□□ -1.58
SEC11C-205ENST00000588875 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
SEC11C-205ENST00000588875 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
SEC11C-205ENST00000588875 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
SEC11C-205ENST00000588875 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
SEC11C-205ENST00000588875 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
SEC11C-205ENST00000588875 MT1AP04731 61 aa4.96□□□□□ -1.62
SEC11C-205ENST00000588875 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
SEC11C-205ENST00000588875 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
SEC11C-205ENST00000588875 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
SEC11C-205ENST00000588875 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
SEC11C-205ENST00000588875 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
SEC11C-205ENST00000588875 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
SEC11C-205ENST00000588875 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
SEC11C-205ENST00000588875 MT3P25713 68 aa4.56□□□□□ -1.68
SEC11C-205ENST00000588875 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
SEC11C-205ENST00000588875 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
SEC11C-205ENST00000588875 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
SEC11C-205ENST00000588875 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
SEC11C-205ENST00000588875 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
SEC11C-205ENST00000588875 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
SEC11C-205ENST00000588875 LCE1CQ5T751 118 aa4□□□□□ -1.77
SEC11C-205ENST00000588875 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
SEC11C-205ENST00000588875 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
SEC11C-205ENST00000588875 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
SEC11C-205ENST00000588875 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SEC11C-205ENST00000588875 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
SEC11C-205ENST00000588875 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
SEC11C-205ENST00000588875 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
SEC11C-205ENST00000588875 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
SEC11C-205ENST00000588875 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
SEC11C-205ENST00000588875 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
SEC11C-205ENST00000588875 INE1O15225 51 aa2.99□□□□□ -1.93
SEC11C-205ENST00000588875 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
SEC11C-205ENST00000588875 PRM1P04553 51 aa2.65□□□□□ -1.99
SEC11C-205ENST00000588875 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms