RNA–Protein interactions for RNA: ENST00000588458.1

ABCA8-210, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-210ENST00000588458 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
ABCA8-210ENST00000588458 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
ABCA8-210ENST00000588458 MT1EP04732 61 aa4.79□□□□□ -1.64
ABCA8-210ENST00000588458 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
ABCA8-210ENST00000588458 V9GYY9 64 aa4.78□□□□□ -1.64
ABCA8-210ENST00000588458 PSPHP1O15172 72 aa4.76□□□□□ -1.65
ABCA8-210ENST00000588458 A0A0D9SG42 100 aa4.75□□□□□ -1.65
ABCA8-210ENST00000588458 A8MU10 97 aa4.72□□□□□ -1.65
ABCA8-210ENST00000588458 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
ABCA8-210ENST00000588458 UQCR11O14957 56 aa4.69□□□□□ -1.66
ABCA8-210ENST00000588458 KRTAP12-1P59990 96 aa4.68□□□□□ -1.66
ABCA8-210ENST00000588458 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
ABCA8-210ENST00000588458 MT1GP13640 62 aa4.67□□□□□ -1.66
ABCA8-210ENST00000588458 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
ABCA8-210ENST00000588458 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
ABCA8-210ENST00000588458 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
ABCA8-210ENST00000588458 MT4P47944 62 aa4.62□□□□□ -1.67
ABCA8-210ENST00000588458 A6NED7 52 aa4.59□□□□□ -1.67
ABCA8-210ENST00000588458 MT1MQ8N339 61 aa4.58□□□□□ -1.68
ABCA8-210ENST00000588458 MT1LQ93083 61 aa4.55□□□□□ -1.68
ABCA8-210ENST00000588458 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
ABCA8-210ENST00000588458 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
ABCA8-210ENST00000588458 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
ABCA8-210ENST00000588458 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
ABCA8-210ENST00000588458 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
ABCA8-210ENST00000588458 AHNAK2Q8IVF2 5795 aa4.45□□□□□ -1.7
ABCA8-210ENST00000588458 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
ABCA8-210ENST00000588458 TNP1P09430 55 aa4.44□□□□□ -1.7
ABCA8-210ENST00000588458 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
ABCA8-210ENST00000588458 K7ERS5 55 aa4.42□□□□□ -1.7
ABCA8-210ENST00000588458 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
ABCA8-210ENST00000588458 BRK1Q8WUW1 75 aa4.34□□□□□ -1.71
ABCA8-210ENST00000588458 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
ABCA8-210ENST00000588458 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
ABCA8-210ENST00000588458 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
ABCA8-210ENST00000588458 ROMO1P60602 79 aa4.24□□□□□ -1.73
ABCA8-210ENST00000588458 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
ABCA8-210ENST00000588458 KRTAP20-2Q3LI61 65 aa4.24□□□□□ -1.73
ABCA8-210ENST00000588458 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
ABCA8-210ENST00000588458 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
ABCA8-210ENST00000588458 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
ABCA8-210ENST00000588458 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
ABCA8-210ENST00000588458 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
ABCA8-210ENST00000588458 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
ABCA8-210ENST00000588458 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
ABCA8-210ENST00000588458 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
ABCA8-210ENST00000588458 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
ABCA8-210ENST00000588458 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
ABCA8-210ENST00000588458 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
ABCA8-210ENST00000588458 MT1AP04731 61 aa3.86□□□□□ -1.79
ABCA8-210ENST00000588458 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
ABCA8-210ENST00000588458 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
ABCA8-210ENST00000588458 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
ABCA8-210ENST00000588458 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
ABCA8-210ENST00000588458 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
ABCA8-210ENST00000588458 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
ABCA8-210ENST00000588458 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
ABCA8-210ENST00000588458 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
ABCA8-210ENST00000588458 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
ABCA8-210ENST00000588458 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
ABCA8-210ENST00000588458 SVIPQ8NHG7 77 aa3.6□□□□□ -1.83
ABCA8-210ENST00000588458 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
ABCA8-210ENST00000588458 MT3P25713 68 aa3.57□□□□□ -1.84
ABCA8-210ENST00000588458 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
ABCA8-210ENST00000588458 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
ABCA8-210ENST00000588458 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
ABCA8-210ENST00000588458 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
ABCA8-210ENST00000588458 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
ABCA8-210ENST00000588458 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
ABCA8-210ENST00000588458 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
ABCA8-210ENST00000588458 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
ABCA8-210ENST00000588458 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
ABCA8-210ENST00000588458 A0A0A0MQY5 61 aa2.43□□□□□ -2.02
ABCA8-210ENST00000588458 INE1O15225 51 aa2.36□□□□□ -2.03
ABCA8-210ENST00000588458 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
ABCA8-210ENST00000588458 PRM1P04553 51 aa2.21□□□□□ -2.06
ABCA8-210ENST00000588458 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
ABCA8-210ENST00000588458 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 78.2 ms