RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
CLPTM1-208ENST00000588274 MT1GP13640 62 aa5□□□□□ -1.61
CLPTM1-208ENST00000588274 ACYP2P14621 99 aa5□□□□□ -1.61
CLPTM1-208ENST00000588274 COA5Q86WW8 74 aa5□□□□□ -1.61
CLPTM1-208ENST00000588274 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
CLPTM1-208ENST00000588274 LINC01558Q9Y6Z2 57 aa4.97□□□□□ -1.61
CLPTM1-208ENST00000588274 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
CLPTM1-208ENST00000588274 MT1MQ8N339 61 aa4.96□□□□□ -1.62
CLPTM1-208ENST00000588274 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
CLPTM1-208ENST00000588274 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
CLPTM1-208ENST00000588274 PP632Q6XCG6 107 aa4.9□□□□□ -1.63
CLPTM1-208ENST00000588274 MT1LQ93083 61 aa4.9□□□□□ -1.63
CLPTM1-208ENST00000588274 A8MU10 97 aa4.89□□□□□ -1.63
CLPTM1-208ENST00000588274 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
CLPTM1-208ENST00000588274 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
CLPTM1-208ENST00000588274 A0A0D9SG42 100 aa4.87□□□□□ -1.63
CLPTM1-208ENST00000588274 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
CLPTM1-208ENST00000588274 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
CLPTM1-208ENST00000588274 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
CLPTM1-208ENST00000588274 ROMO1P60602 79 aa4.73□□□□□ -1.65
CLPTM1-208ENST00000588274 A0A1B0GU69 56 aa4.72□□□□□ -1.65
CLPTM1-208ENST00000588274 UQCR11O14957 56 aa4.7□□□□□ -1.66
CLPTM1-208ENST00000588274 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
CLPTM1-208ENST00000588274 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
CLPTM1-208ENST00000588274 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
CLPTM1-208ENST00000588274 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
CLPTM1-208ENST00000588274 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
CLPTM1-208ENST00000588274 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
CLPTM1-208ENST00000588274 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.67
CLPTM1-208ENST00000588274 SPINT4Q6UDR6 99 aa4.63□□□□□ -1.67
CLPTM1-208ENST00000588274 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
CLPTM1-208ENST00000588274 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
CLPTM1-208ENST00000588274 A0A1B0GU33 70 aa4.58□□□□□ -1.68
CLPTM1-208ENST00000588274 K7ERS5 55 aa4.58□□□□□ -1.68
CLPTM1-208ENST00000588274 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
CLPTM1-208ENST00000588274 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
CLPTM1-208ENST00000588274 TNP1P09430 55 aa4.46□□□□□ -1.7
CLPTM1-208ENST00000588274 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
CLPTM1-208ENST00000588274 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
CLPTM1-208ENST00000588274 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
CLPTM1-208ENST00000588274 AHNAKQ09666 5890 aaKnown RBP4.39□□□□□ -1.71
CLPTM1-208ENST00000588274 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
CLPTM1-208ENST00000588274 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
CLPTM1-208ENST00000588274 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
CLPTM1-208ENST00000588274 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
CLPTM1-208ENST00000588274 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
CLPTM1-208ENST00000588274 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
CLPTM1-208ENST00000588274 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
CLPTM1-208ENST00000588274 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
CLPTM1-208ENST00000588274 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
CLPTM1-208ENST00000588274 MT1AP04731 61 aa4.15□□□□□ -1.75
CLPTM1-208ENST00000588274 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
CLPTM1-208ENST00000588274 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
CLPTM1-208ENST00000588274 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
CLPTM1-208ENST00000588274 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
CLPTM1-208ENST00000588274 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
CLPTM1-208ENST00000588274 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
CLPTM1-208ENST00000588274 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
CLPTM1-208ENST00000588274 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
CLPTM1-208ENST00000588274 INE1O15225 51 aa3.78□□□□□ -1.8
CLPTM1-208ENST00000588274 MT3P25713 68 aa3.76□□□□□ -1.81
CLPTM1-208ENST00000588274 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
CLPTM1-208ENST00000588274 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
CLPTM1-208ENST00000588274 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
CLPTM1-208ENST00000588274 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
CLPTM1-208ENST00000588274 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
CLPTM1-208ENST00000588274 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
CLPTM1-208ENST00000588274 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
CLPTM1-208ENST00000588274 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
CLPTM1-208ENST00000588274 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
CLPTM1-208ENST00000588274 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
CLPTM1-208ENST00000588274 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
CLPTM1-208ENST00000588274 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
CLPTM1-208ENST00000588274 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
CLPTM1-208ENST00000588274 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
CLPTM1-208ENST00000588274 PRM1P04553 51 aa2.24□□□□□ -2.05
CLPTM1-208ENST00000588274 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
CLPTM1-208ENST00000588274 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 139.4 ms