RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 PP632Q6XCG6 107 aa6.87□□□□□ -1.31
CIRBP-217ENST00000588230 MT1LQ93083 61 aa6.84□□□□□ -1.31
CIRBP-217ENST00000588230 PCP4P48539 62 aa6.83□□□□□ -1.32
CIRBP-217ENST00000588230 A6NED7 52 aa6.8□□□□□ -1.32
CIRBP-217ENST00000588230 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
CIRBP-217ENST00000588230 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
CIRBP-217ENST00000588230 MT1MQ8N339 61 aa6.78□□□□□ -1.32
CIRBP-217ENST00000588230 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
CIRBP-217ENST00000588230 GPR98Q8WXG9 6306 aa6.72□□□□□ -1.33
CIRBP-217ENST00000588230 KRTAP4-9Q9BYQ8 210 aa6.72□□□□□ -1.33
CIRBP-217ENST00000588230 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
CIRBP-217ENST00000588230 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
CIRBP-217ENST00000588230 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
CIRBP-217ENST00000588230 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
CIRBP-217ENST00000588230 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
CIRBP-217ENST00000588230 HMCN1Q96RW7 5635 aa6.52□□□□□ -1.37
CIRBP-217ENST00000588230 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
CIRBP-217ENST00000588230 KRTAP5-4Q6L8H1 288 aa6.49□□□□□ -1.37
CIRBP-217ENST00000588230 SVIPQ8NHG7 77 aa6.49□□□□□ -1.37
CIRBP-217ENST00000588230 MT4P47944 62 aa6.47□□□□□ -1.37
CIRBP-217ENST00000588230 ROMO1P60602 79 aa6.46□□□□□ -1.38
CIRBP-217ENST00000588230 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
CIRBP-217ENST00000588230 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
CIRBP-217ENST00000588230 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
CIRBP-217ENST00000588230 AHNAK2Q8IVF2 5795 aa6.29□□□□□ -1.4
CIRBP-217ENST00000588230 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
CIRBP-217ENST00000588230 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
CIRBP-217ENST00000588230 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
CIRBP-217ENST00000588230 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
CIRBP-217ENST00000588230 KRTAP20-2Q3LI61 65 aa6.1□□□□□ -1.43
CIRBP-217ENST00000588230 SPRR5A0A1B0GTR4 108 aa6.05□□□□□ -1.44
CIRBP-217ENST00000588230 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
CIRBP-217ENST00000588230 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
CIRBP-217ENST00000588230 BRK1Q8WUW1 75 aa6□□□□□ -1.45
CIRBP-217ENST00000588230 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
CIRBP-217ENST00000588230 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
CIRBP-217ENST00000588230 KRTAP9-6A8MVA2 160 aa5.83□□□□□ -1.48
CIRBP-217ENST00000588230 MT1AP04731 61 aa5.83□□□□□ -1.48
CIRBP-217ENST00000588230 KRTAP6-1Q3LI64 71 aa5.78□□□□□ -1.48
CIRBP-217ENST00000588230 KRTAP5-2Q701N4 177 aa5.69□□□□□ -1.5
CIRBP-217ENST00000588230 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
CIRBP-217ENST00000588230 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
CIRBP-217ENST00000588230 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
CIRBP-217ENST00000588230 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
CIRBP-217ENST00000588230 KRTAP5-8O75690 187 aa5.41□□□□□ -1.54
CIRBP-217ENST00000588230 PRAC1Q96KF2 57 aa5.4□□□□□ -1.54
CIRBP-217ENST00000588230 MT3P25713 68 aa5.34□□□□□ -1.55
CIRBP-217ENST00000588230 PRO0628Q9UI54 55 aa5.31□□□□□ -1.56
CIRBP-217ENST00000588230 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
CIRBP-217ENST00000588230 MUC5BQ9HC84 5762 aaPredicted RBP5.19□□□□□ -1.58
CIRBP-217ENST00000588230 AHNAKQ09666 5890 aaKnown RBP5.17□□□□□ -1.58
CIRBP-217ENST00000588230 MUC5ACP98088 5654 aa5.16□□□□□ -1.58
CIRBP-217ENST00000588230 H3BS24 57 aa5.15□□□□□ -1.59
CIRBP-217ENST00000588230 KRTAP5-1Q6L8H4 278 aa5.11□□□□□ -1.59
CIRBP-217ENST00000588230 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
CIRBP-217ENST00000588230 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
CIRBP-217ENST00000588230 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
CIRBP-217ENST00000588230 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
CIRBP-217ENST00000588230 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
CIRBP-217ENST00000588230 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
CIRBP-217ENST00000588230 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
CIRBP-217ENST00000588230 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
CIRBP-217ENST00000588230 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
CIRBP-217ENST00000588230 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
CIRBP-217ENST00000588230 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
CIRBP-217ENST00000588230 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.12□□□□□ -1.75
CIRBP-217ENST00000588230 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
CIRBP-217ENST00000588230 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
CIRBP-217ENST00000588230 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
CIRBP-217ENST00000588230 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
CIRBP-217ENST00000588230 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
CIRBP-217ENST00000588230 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
CIRBP-217ENST00000588230 PRM1P04553 51 aa3.3□□□□□ -1.88
CIRBP-217ENST00000588230 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
CIRBP-217ENST00000588230 INE1O15225 51 aa3.04□□□□□ -1.92
CIRBP-217ENST00000588230 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
CIRBP-217ENST00000588230 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 103.5 ms