RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
TPM4-207ENST00000588032 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
TPM4-207ENST00000588032 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
TPM4-207ENST00000588032 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
TPM4-207ENST00000588032 UQCR11O14957 56 aa3.86□□□□□ -1.79
TPM4-207ENST00000588032 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
TPM4-207ENST00000588032 V9GYY9 64 aa3.83□□□□□ -1.8
TPM4-207ENST00000588032 SPRR2DP22532 72 aa3.82□□□□□ -1.8
TPM4-207ENST00000588032 TNP1P09430 55 aa3.79□□□□□ -1.8
TPM4-207ENST00000588032 Q1T7F1 81 aa3.78□□□□□ -1.8
TPM4-207ENST00000588032 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
TPM4-207ENST00000588032 RPS28P62857 69 aaKnown RBP3.77□□□□□ -1.81
TPM4-207ENST00000588032 MIR22HGQ0VDD5 57 aa3.77□□□□□ -1.81
TPM4-207ENST00000588032 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
TPM4-207ENST00000588032 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
TPM4-207ENST00000588032 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
TPM4-207ENST00000588032 MT1EP04732 61 aa3.75□□□□□ -1.81
TPM4-207ENST00000588032 K7ERS5 55 aa3.72□□□□□ -1.81
TPM4-207ENST00000588032 PSPHP1O15172 72 aa3.72□□□□□ -1.81
TPM4-207ENST00000588032 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
TPM4-207ENST00000588032 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
TPM4-207ENST00000588032 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
TPM4-207ENST00000588032 MT1GP13640 62 aa3.66□□□□□ -1.82
TPM4-207ENST00000588032 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
TPM4-207ENST00000588032 A6NED7 52 aa3.63□□□□□ -1.83
TPM4-207ENST00000588032 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
TPM4-207ENST00000588032 MT1LQ93083 61 aa3.6□□□□□ -1.83
TPM4-207ENST00000588032 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
TPM4-207ENST00000588032 MT1MQ8N339 61 aa3.56□□□□□ -1.84
TPM4-207ENST00000588032 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
TPM4-207ENST00000588032 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
TPM4-207ENST00000588032 PRO0628Q9UI54 55 aa3.55□□□□□ -1.84
TPM4-207ENST00000588032 CDC42SE1Q9NRR8 79 aa3.51□□□□□ -1.85
TPM4-207ENST00000588032 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
TPM4-207ENST00000588032 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
TPM4-207ENST00000588032 ROMO1P60602 79 aa3.45□□□□□ -1.86
TPM4-207ENST00000588032 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
TPM4-207ENST00000588032 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
TPM4-207ENST00000588032 MT3P25713 68 aa3.4□□□□□ -1.87
TPM4-207ENST00000588032 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
TPM4-207ENST00000588032 PMAIP1Q13794 54 aa3.34□□□□□ -1.87
TPM4-207ENST00000588032 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
TPM4-207ENST00000588032 MT4P47944 62 aa3.31□□□□□ -1.88
TPM4-207ENST00000588032 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
TPM4-207ENST00000588032 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
TPM4-207ENST00000588032 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
TPM4-207ENST00000588032 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
TPM4-207ENST00000588032 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
TPM4-207ENST00000588032 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
TPM4-207ENST00000588032 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
TPM4-207ENST00000588032 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
TPM4-207ENST00000588032 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
TPM4-207ENST00000588032 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
TPM4-207ENST00000588032 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
TPM4-207ENST00000588032 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
TPM4-207ENST00000588032 MT1AP04731 61 aa3.08□□□□□ -1.92
TPM4-207ENST00000588032 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
TPM4-207ENST00000588032 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
TPM4-207ENST00000588032 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
TPM4-207ENST00000588032 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
TPM4-207ENST00000588032 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
TPM4-207ENST00000588032 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
TPM4-207ENST00000588032 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
TPM4-207ENST00000588032 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TPM4-207ENST00000588032 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
TPM4-207ENST00000588032 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
TPM4-207ENST00000588032 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
TPM4-207ENST00000588032 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
TPM4-207ENST00000588032 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
TPM4-207ENST00000588032 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
TPM4-207ENST00000588032 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
TPM4-207ENST00000588032 INE1O15225 51 aa2.2□□□□□ -2.06
TPM4-207ENST00000588032 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
TPM4-207ENST00000588032 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
TPM4-207ENST00000588032 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
TPM4-207ENST00000588032 PRM1P04553 51 aa1.74□□□□□ -2.13
TPM4-207ENST00000588032 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
TPM4-207ENST00000588032 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms