RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
TRIM47-205ENST00000587774 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
TRIM47-205ENST00000587774 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
TRIM47-205ENST00000587774 LINC01558Q9Y6Z2 57 aa6.57□□□□□ -1.36
TRIM47-205ENST00000587774 KRTAP4-3Q9BYR4 195 aa6.56□□□□□ -1.36
TRIM47-205ENST00000587774 TNP1P09430 55 aa6.53□□□□□ -1.36
TRIM47-205ENST00000587774 PRR15LQ9BU68 103 aa6.51□□□□□ -1.37
TRIM47-205ENST00000587774 AHNAK2Q8IVF2 5795 aa6.49□□□□□ -1.37
TRIM47-205ENST00000587774 KRTAP5-4Q6L8H1 288 aa6.49□□□□□ -1.37
TRIM47-205ENST00000587774 V9GYY9 64 aa6.49□□□□□ -1.37
TRIM47-205ENST00000587774 Q1T7F1 81 aa6.48□□□□□ -1.37
TRIM47-205ENST00000587774 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
TRIM47-205ENST00000587774 PSPHP1O15172 72 aa6.38□□□□□ -1.39
TRIM47-205ENST00000587774 KRTAP5-10Q6L8G5 202 aa6.37□□□□□ -1.39
TRIM47-205ENST00000587774 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
TRIM47-205ENST00000587774 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
TRIM47-205ENST00000587774 UQCR11O14957 56 aa6.3□□□□□ -1.4
TRIM47-205ENST00000587774 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
TRIM47-205ENST00000587774 A6NED7 52 aa6.19□□□□□ -1.42
TRIM47-205ENST00000587774 KRTAP5-7Q6L8G8 165 aa6.17□□□□□ -1.42
TRIM47-205ENST00000587774 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
TRIM47-205ENST00000587774 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.42
TRIM47-205ENST00000587774 KRTAP5-3Q6L8H2 238 aa6.14□□□□□ -1.43
TRIM47-205ENST00000587774 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
TRIM47-205ENST00000587774 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
TRIM47-205ENST00000587774 CDC42SE1Q9NRR8 79 aa6.05□□□□□ -1.44
TRIM47-205ENST00000587774 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
TRIM47-205ENST00000587774 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
TRIM47-205ENST00000587774 K7ERS5 55 aa5.98□□□□□ -1.45
TRIM47-205ENST00000587774 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
TRIM47-205ENST00000587774 BRK1Q8WUW1 75 aa5.9□□□□□ -1.46
TRIM47-205ENST00000587774 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
TRIM47-205ENST00000587774 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
TRIM47-205ENST00000587774 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
TRIM47-205ENST00000587774 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
TRIM47-205ENST00000587774 ROMO1P60602 79 aa5.69□□□□□ -1.5
TRIM47-205ENST00000587774 MT1AP04731 61 aa5.67□□□□□ -1.5
TRIM47-205ENST00000587774 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
TRIM47-205ENST00000587774 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
TRIM47-205ENST00000587774 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
TRIM47-205ENST00000587774 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
TRIM47-205ENST00000587774 PMAIP1Q13794 54 aa5.55□□□□□ -1.52
TRIM47-205ENST00000587774 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
TRIM47-205ENST00000587774 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
TRIM47-205ENST00000587774 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
TRIM47-205ENST00000587774 KRTAP5-8O75690 187 aa5.47□□□□□ -1.53
TRIM47-205ENST00000587774 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
TRIM47-205ENST00000587774 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
TRIM47-205ENST00000587774 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
TRIM47-205ENST00000587774 MUC5ACP98088 5654 aa5.42□□□□□ -1.54
TRIM47-205ENST00000587774 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
TRIM47-205ENST00000587774 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
TRIM47-205ENST00000587774 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
TRIM47-205ENST00000587774 MT3P25713 68 aa5.17□□□□□ -1.58
TRIM47-205ENST00000587774 KRTAP5-1Q6L8H4 278 aa5.11□□□□□ -1.59
TRIM47-205ENST00000587774 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
TRIM47-205ENST00000587774 H3BS24 57 aa4.86□□□□□ -1.63
TRIM47-205ENST00000587774 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
TRIM47-205ENST00000587774 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
TRIM47-205ENST00000587774 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
TRIM47-205ENST00000587774 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
TRIM47-205ENST00000587774 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
TRIM47-205ENST00000587774 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
TRIM47-205ENST00000587774 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
TRIM47-205ENST00000587774 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
TRIM47-205ENST00000587774 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
TRIM47-205ENST00000587774 NDUFAF8A1L188 74 aa4□□□□□ -1.77
TRIM47-205ENST00000587774 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
TRIM47-205ENST00000587774 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
TRIM47-205ENST00000587774 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
TRIM47-205ENST00000587774 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
TRIM47-205ENST00000587774 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
TRIM47-205ENST00000587774 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
TRIM47-205ENST00000587774 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
TRIM47-205ENST00000587774 INE1O15225 51 aa3.3□□□□□ -1.88
TRIM47-205ENST00000587774 PRM1P04553 51 aa2.95□□□□□ -1.94
TRIM47-205ENST00000587774 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
TRIM47-205ENST00000587774 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 97.7 ms