RNA–Protein interactions for RNA: ENST00000587275.1

U2AF2-204, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

TSL 4

Gene U2AF2, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-204ENST00000587275 TNP1P09430 55 aa6.76□□□□□ -1.33
U2AF2-204ENST00000587275 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
U2AF2-204ENST00000587275 KRTAP5-3Q6L8H2 238 aa6.75□□□□□ -1.33
U2AF2-204ENST00000587275 COX7CP15954 63 aa6.74□□□□□ -1.33
U2AF2-204ENST00000587275 KRTAP5-7Q6L8G8 165 aa6.74□□□□□ -1.33
U2AF2-204ENST00000587275 A0A1B0GU69 56 aa6.71□□□□□ -1.34
U2AF2-204ENST00000587275 KRTAP20-2Q3LI61 65 aa6.69□□□□□ -1.34
U2AF2-204ENST00000587275 KRTAP5-5Q701N2 237 aaPredicted RBP6.68□□□□□ -1.34
U2AF2-204ENST00000587275 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
U2AF2-204ENST00000587275 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
U2AF2-204ENST00000587275 SYNE1Q8NF91 8797 aaKnown RBP6.53□□□□□ -1.36
U2AF2-204ENST00000587275 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
U2AF2-204ENST00000587275 KRTAP12-4P60329 112 aa6.42□□□□□ -1.38
U2AF2-204ENST00000587275 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
U2AF2-204ENST00000587275 LINC01558Q9Y6Z2 57 aa6.32□□□□□ -1.4
U2AF2-204ENST00000587275 CCDC179H3BU77 68 aa6.27□□□□□ -1.41
U2AF2-204ENST00000587275 ANAPC13Q9BS18 74 aa6.27□□□□□ -1.41
U2AF2-204ENST00000587275 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
U2AF2-204ENST00000587275 UQCR11O14957 56 aa6.16□□□□□ -1.42
U2AF2-204ENST00000587275 ATP5EP56381 51 aaPredicted RBP6.16□□□□□ -1.42
U2AF2-204ENST00000587275 KRTAP5-2Q701N4 177 aa6.16□□□□□ -1.42
U2AF2-204ENST00000587275 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
U2AF2-204ENST00000587275 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
U2AF2-204ENST00000587275 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
U2AF2-204ENST00000587275 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
U2AF2-204ENST00000587275 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
U2AF2-204ENST00000587275 MT1AP04731 61 aa6.05□□□□□ -1.44
U2AF2-204ENST00000587275 MIR22HGQ0VDD5 57 aa6.02□□□□□ -1.45
U2AF2-204ENST00000587275 KRTAP5-8O75690 187 aa6.01□□□□□ -1.45
U2AF2-204ENST00000587275 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
U2AF2-204ENST00000587275 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
U2AF2-204ENST00000587275 PCP4P48539 62 aa5.91□□□□□ -1.46
U2AF2-204ENST00000587275 TMEM258P61165 79 aa5.9□□□□□ -1.46
U2AF2-204ENST00000587275 MUC5ACP98088 5654 aa5.9□□□□□ -1.46
U2AF2-204ENST00000587275 MUC5BQ9HC84 5762 aaPredicted RBP5.89□□□□□ -1.47
U2AF2-204ENST00000587275 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
U2AF2-204ENST00000587275 AHNAKQ09666 5890 aaKnown RBP5.87□□□□□ -1.47
U2AF2-204ENST00000587275 OBSCNQ5VST9 7968 aa5.86□□□□□ -1.47
U2AF2-204ENST00000587275 KRTAP6-2Q3LI66 62 aa5.86□□□□□ -1.47
U2AF2-204ENST00000587275 K7ERS5 55 aa5.84□□□□□ -1.47
U2AF2-204ENST00000587275 PSPHP1O15172 72 aa5.77□□□□□ -1.49
U2AF2-204ENST00000587275 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
U2AF2-204ENST00000587275 Q1T7F1 81 aa5.62□□□□□ -1.51
U2AF2-204ENST00000587275 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
U2AF2-204ENST00000587275 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
U2AF2-204ENST00000587275 V9GYY9 64 aa5.57□□□□□ -1.52
U2AF2-204ENST00000587275 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
U2AF2-204ENST00000587275 ROMO1P60602 79 aa5.5□□□□□ -1.53
U2AF2-204ENST00000587275 MT3P25713 68 aa5.49□□□□□ -1.53
U2AF2-204ENST00000587275 A6NED7 52 aa5.47□□□□□ -1.53
U2AF2-204ENST00000587275 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
U2AF2-204ENST00000587275 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
U2AF2-204ENST00000587275 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
U2AF2-204ENST00000587275 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
U2AF2-204ENST00000587275 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
U2AF2-204ENST00000587275 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
U2AF2-204ENST00000587275 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
U2AF2-204ENST00000587275 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
U2AF2-204ENST00000587275 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
U2AF2-204ENST00000587275 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
U2AF2-204ENST00000587275 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
U2AF2-204ENST00000587275 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
U2AF2-204ENST00000587275 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
U2AF2-204ENST00000587275 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
U2AF2-204ENST00000587275 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
U2AF2-204ENST00000587275 PHGR1C9JFL3 82 aa4.05□□□□□ -1.76
U2AF2-204ENST00000587275 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
U2AF2-204ENST00000587275 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
U2AF2-204ENST00000587275 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
U2AF2-204ENST00000587275 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
U2AF2-204ENST00000587275 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
U2AF2-204ENST00000587275 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
U2AF2-204ENST00000587275 H3BS24 57 aa3.15□□□□□ -1.91
U2AF2-204ENST00000587275 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
U2AF2-204ENST00000587275 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
U2AF2-204ENST00000587275 INE1O15225 51 aa2.89□□□□□ -1.95
U2AF2-204ENST00000587275 PRM1P04553 51 aa2.84□□□□□ -1.95
U2AF2-204ENST00000587275 MUC16Q8WXI7 14507 aa2.62□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 7.7 ms