RNA–Protein interactions for RNA: ENST00000587136.1

PTBP1-212, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-212ENST00000587136 MT1GP13640 62 aa7.57□□□□□ -1.2
PTBP1-212ENST00000587136 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
PTBP1-212ENST00000587136 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
PTBP1-212ENST00000587136 A6NED7 52 aa7.53□□□□□ -1.2
PTBP1-212ENST00000587136 MT1LQ93083 61 aa7.52□□□□□ -1.21
PTBP1-212ENST00000587136 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
PTBP1-212ENST00000587136 DSTQ03001 7570 aaKnown RBP7.44□□□□□ -1.22
PTBP1-212ENST00000587136 MT1MQ8N339 61 aa7.44□□□□□ -1.22
PTBP1-212ENST00000587136 KRTAP12-3P60328 96 aa7.41□□□□□ -1.22
PTBP1-212ENST00000587136 KRTAP4-3Q9BYR4 195 aa7.25□□□□□ -1.25
PTBP1-212ENST00000587136 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
PTBP1-212ENST00000587136 GPR98Q8WXG9 6306 aa7.24□□□□□ -1.25
PTBP1-212ENST00000587136 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
PTBP1-212ENST00000587136 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
PTBP1-212ENST00000587136 ROMO1P60602 79 aa7.14□□□□□ -1.27
PTBP1-212ENST00000587136 KRTAP4-9Q9BYQ8 210 aa7.13□□□□□ -1.27
PTBP1-212ENST00000587136 LCE4AQ5TA78 99 aa7.08□□□□□ -1.28
PTBP1-212ENST00000587136 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
PTBP1-212ENST00000587136 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
PTBP1-212ENST00000587136 LCE1DQ5T752 114 aa7□□□□□ -1.29
PTBP1-212ENST00000587136 KRTAP5-4Q6L8H1 288 aa6.97□□□□□ -1.29
PTBP1-212ENST00000587136 MT4P47944 62 aa6.96□□□□□ -1.3
PTBP1-212ENST00000587136 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
PTBP1-212ENST00000587136 HMCN1Q96RW7 5635 aa6.78□□□□□ -1.32
PTBP1-212ENST00000587136 KRTAP5-5Q701N2 237 aaPredicted RBP6.78□□□□□ -1.32
PTBP1-212ENST00000587136 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
PTBP1-212ENST00000587136 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
PTBP1-212ENST00000587136 BRK1Q8WUW1 75 aa6.67□□□□□ -1.34
PTBP1-212ENST00000587136 AHNAK2Q8IVF2 5795 aa6.65□□□□□ -1.34
PTBP1-212ENST00000587136 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
PTBP1-212ENST00000587136 SPRR5A0A1B0GTR4 108 aa6.56□□□□□ -1.36
PTBP1-212ENST00000587136 KRTAP20-2Q3LI61 65 aa6.56□□□□□ -1.36
PTBP1-212ENST00000587136 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
PTBP1-212ENST00000587136 SYNE1Q8NF91 8797 aaKnown RBP6.42□□□□□ -1.38
PTBP1-212ENST00000587136 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
PTBP1-212ENST00000587136 MT1AP04731 61 aa6.41□□□□□ -1.38
PTBP1-212ENST00000587136 KRTAP5-7Q6L8G8 165 aa6.37□□□□□ -1.39
PTBP1-212ENST00000587136 KRTAP5-3Q6L8H2 238 aa6.36□□□□□ -1.39
PTBP1-212ENST00000587136 KRTAP6-1Q3LI64 71 aa6.34□□□□□ -1.39
PTBP1-212ENST00000587136 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
PTBP1-212ENST00000587136 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
PTBP1-212ENST00000587136 KRTAP5-2Q701N4 177 aa6.13□□□□□ -1.43
PTBP1-212ENST00000587136 KRTAP6-2Q3LI66 62 aa6.02□□□□□ -1.45
PTBP1-212ENST00000587136 PRAC1Q96KF2 57 aa5.99□□□□□ -1.45
PTBP1-212ENST00000587136 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
PTBP1-212ENST00000587136 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
PTBP1-212ENST00000587136 MT3P25713 68 aa5.86□□□□□ -1.47
PTBP1-212ENST00000587136 KRTAP5-8O75690 187 aa5.73□□□□□ -1.49
PTBP1-212ENST00000587136 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
PTBP1-212ENST00000587136 KTN1-AS1Q86SY8 53 aa5.66□□□□□ -1.5
PTBP1-212ENST00000587136 AHNAKQ09666 5890 aaKnown RBP5.55□□□□□ -1.52
PTBP1-212ENST00000587136 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
PTBP1-212ENST00000587136 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
PTBP1-212ENST00000587136 KRTAP5-1Q6L8H4 278 aa5.46□□□□□ -1.54
PTBP1-212ENST00000587136 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.54
PTBP1-212ENST00000587136 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
PTBP1-212ENST00000587136 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
PTBP1-212ENST00000587136 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
PTBP1-212ENST00000587136 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
PTBP1-212ENST00000587136 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
PTBP1-212ENST00000587136 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
PTBP1-212ENST00000587136 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
PTBP1-212ENST00000587136 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
PTBP1-212ENST00000587136 H3BS24 57 aa4.51□□□□□ -1.69
PTBP1-212ENST00000587136 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
PTBP1-212ENST00000587136 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
PTBP1-212ENST00000587136 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
PTBP1-212ENST00000587136 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
PTBP1-212ENST00000587136 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
PTBP1-212ENST00000587136 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
PTBP1-212ENST00000587136 PHGR1C9JFL3 82 aa3.86□□□□□ -1.79
PTBP1-212ENST00000587136 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
PTBP1-212ENST00000587136 PRM1P04553 51 aa3.65□□□□□ -1.83
PTBP1-212ENST00000587136 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
PTBP1-212ENST00000587136 INE1O15225 51 aa3.41□□□□□ -1.86
PTBP1-212ENST00000587136 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
PTBP1-212ENST00000587136 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
PTBP1-212ENST00000587136 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms