RNA–Protein interactions for RNA: ENST00000586803.1

CALR-203, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-203ENST00000586803 MIR22HGQ0VDD5 57 aa4.73□□□□□ -1.65
CALR-203ENST00000586803 MT1MQ8N339 61 aa4.72□□□□□ -1.65
CALR-203ENST00000586803 V9GYY9 64 aa4.72□□□□□ -1.65
CALR-203ENST00000586803 K7ERS5 55 aa4.67□□□□□ -1.66
CALR-203ENST00000586803 Q1T7F1 81 aa4.65□□□□□ -1.67
CALR-203ENST00000586803 PSPHP1O15172 72 aa4.64□□□□□ -1.67
CALR-203ENST00000586803 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
CALR-203ENST00000586803 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
CALR-203ENST00000586803 H3BS24 57 aa4.6□□□□□ -1.67
CALR-203ENST00000586803 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
CALR-203ENST00000586803 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
CALR-203ENST00000586803 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
CALR-203ENST00000586803 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
CALR-203ENST00000586803 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
CALR-203ENST00000586803 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
CALR-203ENST00000586803 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
CALR-203ENST00000586803 A6NED7 52 aa4.52□□□□□ -1.69
CALR-203ENST00000586803 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
CALR-203ENST00000586803 MT4P47944 62 aa4.47□□□□□ -1.69
CALR-203ENST00000586803 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
CALR-203ENST00000586803 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
CALR-203ENST00000586803 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
CALR-203ENST00000586803 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
CALR-203ENST00000586803 RPS28P62857 69 aaKnown RBP4.41□□□□□ -1.7
CALR-203ENST00000586803 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
CALR-203ENST00000586803 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
CALR-203ENST00000586803 ROMO1P60602 79 aa4.33□□□□□ -1.72
CALR-203ENST00000586803 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
CALR-203ENST00000586803 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
CALR-203ENST00000586803 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
CALR-203ENST00000586803 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
CALR-203ENST00000586803 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
CALR-203ENST00000586803 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
CALR-203ENST00000586803 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
CALR-203ENST00000586803 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
CALR-203ENST00000586803 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
CALR-203ENST00000586803 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
CALR-203ENST00000586803 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
CALR-203ENST00000586803 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
CALR-203ENST00000586803 MT1AP04731 61 aa4.06□□□□□ -1.76
CALR-203ENST00000586803 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
CALR-203ENST00000586803 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
CALR-203ENST00000586803 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
CALR-203ENST00000586803 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
CALR-203ENST00000586803 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
CALR-203ENST00000586803 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
CALR-203ENST00000586803 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
CALR-203ENST00000586803 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
CALR-203ENST00000586803 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
CALR-203ENST00000586803 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
CALR-203ENST00000586803 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
CALR-203ENST00000586803 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
CALR-203ENST00000586803 MT3P25713 68 aa3.69□□□□□ -1.82
CALR-203ENST00000586803 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
CALR-203ENST00000586803 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
CALR-203ENST00000586803 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
CALR-203ENST00000586803 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
CALR-203ENST00000586803 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
CALR-203ENST00000586803 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
CALR-203ENST00000586803 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
CALR-203ENST00000586803 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
CALR-203ENST00000586803 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
CALR-203ENST00000586803 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
CALR-203ENST00000586803 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
CALR-203ENST00000586803 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
CALR-203ENST00000586803 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
CALR-203ENST00000586803 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
CALR-203ENST00000586803 INE1O15225 51 aa2.88□□□□□ -1.95
CALR-203ENST00000586803 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
CALR-203ENST00000586803 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
CALR-203ENST00000586803 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
CALR-203ENST00000586803 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
CALR-203ENST00000586803 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
CALR-203ENST00000586803 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
CALR-203ENST00000586803 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
CALR-203ENST00000586803 PRM1P04553 51 aa2.21□□□□□ -2.06
CALR-203ENST00000586803 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
CALR-203ENST00000586803 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 81.4 ms