RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
TPM4-204ENST00000586499 MT1GP13640 62 aa6.84□□□□□ -1.31
TPM4-204ENST00000586499 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
TPM4-204ENST00000586499 DSTQ03001 7570 aaKnown RBP6.82□□□□□ -1.32
TPM4-204ENST00000586499 MT1LQ93083 61 aa6.79□□□□□ -1.32
TPM4-204ENST00000586499 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
TPM4-204ENST00000586499 MT1MQ8N339 61 aa6.75□□□□□ -1.33
TPM4-204ENST00000586499 BRK1Q8WUW1 75 aa6.74□□□□□ -1.33
TPM4-204ENST00000586499 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
TPM4-204ENST00000586499 K7ERS5 55 aa6.67□□□□□ -1.34
TPM4-204ENST00000586499 KRTAP4-3Q9BYR4 195 aa6.65□□□□□ -1.34
TPM4-204ENST00000586499 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
TPM4-204ENST00000586499 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
TPM4-204ENST00000586499 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
TPM4-204ENST00000586499 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
TPM4-204ENST00000586499 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
TPM4-204ENST00000586499 MT4P47944 62 aa6.47□□□□□ -1.37
TPM4-204ENST00000586499 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
TPM4-204ENST00000586499 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
TPM4-204ENST00000586499 KRTAP5-4Q6L8H1 288 aa6.4□□□□□ -1.38
TPM4-204ENST00000586499 HMCN1Q96RW7 5635 aa6.35□□□□□ -1.39
TPM4-204ENST00000586499 ROMO1P60602 79 aa6.31□□□□□ -1.4
TPM4-204ENST00000586499 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
TPM4-204ENST00000586499 GPR98Q8WXG9 6306 aa6.29□□□□□ -1.4
TPM4-204ENST00000586499 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
TPM4-204ENST00000586499 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
TPM4-204ENST00000586499 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
TPM4-204ENST00000586499 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
TPM4-204ENST00000586499 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
TPM4-204ENST00000586499 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
TPM4-204ENST00000586499 AHNAK2Q8IVF2 5795 aa6.08□□□□□ -1.44
TPM4-204ENST00000586499 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
TPM4-204ENST00000586499 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
TPM4-204ENST00000586499 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
TPM4-204ENST00000586499 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
TPM4-204ENST00000586499 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
TPM4-204ENST00000586499 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
TPM4-204ENST00000586499 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.46
TPM4-204ENST00000586499 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
TPM4-204ENST00000586499 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
TPM4-204ENST00000586499 MT1AP04731 61 aa5.76□□□□□ -1.49
TPM4-204ENST00000586499 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
TPM4-204ENST00000586499 KRTAP5-7Q6L8G8 165 aa5.76□□□□□ -1.49
TPM4-204ENST00000586499 SVIPQ8NHG7 77 aa5.72□□□□□ -1.49
TPM4-204ENST00000586499 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
TPM4-204ENST00000586499 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
TPM4-204ENST00000586499 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
TPM4-204ENST00000586499 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
TPM4-204ENST00000586499 KRTAP5-8O75690 187 aa5.33□□□□□ -1.56
TPM4-204ENST00000586499 MT3P25713 68 aa5.25□□□□□ -1.57
TPM4-204ENST00000586499 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
TPM4-204ENST00000586499 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
TPM4-204ENST00000586499 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
TPM4-204ENST00000586499 MUC5BQ9HC84 5762 aaPredicted RBP4.98□□□□□ -1.61
TPM4-204ENST00000586499 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
TPM4-204ENST00000586499 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
TPM4-204ENST00000586499 AHNAKQ09666 5890 aaKnown RBP4.93□□□□□ -1.62
TPM4-204ENST00000586499 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
TPM4-204ENST00000586499 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
TPM4-204ENST00000586499 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
TPM4-204ENST00000586499 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
TPM4-204ENST00000586499 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
TPM4-204ENST00000586499 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
TPM4-204ENST00000586499 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
TPM4-204ENST00000586499 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
TPM4-204ENST00000586499 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
TPM4-204ENST00000586499 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
TPM4-204ENST00000586499 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
TPM4-204ENST00000586499 INE1O15225 51 aa3.96□□□□□ -1.78
TPM4-204ENST00000586499 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
TPM4-204ENST00000586499 H3BS24 57 aa3.84□□□□□ -1.79
TPM4-204ENST00000586499 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
TPM4-204ENST00000586499 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
TPM4-204ENST00000586499 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
TPM4-204ENST00000586499 PRM1P04553 51 aa3.24□□□□□ -1.89
TPM4-204ENST00000586499 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
TPM4-204ENST00000586499 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
TPM4-204ENST00000586499 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 15.3 ms