RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 Q1T7F1 81 aa3.74□□□□□ -1.81
SMARCA4-209ENST00000586122 PSPHP1O15172 72 aa3.7□□□□□ -1.82
SMARCA4-209ENST00000586122 MT1LQ93083 61 aa3.7□□□□□ -1.82
SMARCA4-209ENST00000586122 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
SMARCA4-209ENST00000586122 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
SMARCA4-209ENST00000586122 MT1MQ8N339 61 aa3.68□□□□□ -1.82
SMARCA4-209ENST00000586122 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
SMARCA4-209ENST00000586122 RPS28P62857 69 aaKnown RBP3.62□□□□□ -1.83
SMARCA4-209ENST00000586122 A6NED7 52 aa3.61□□□□□ -1.83
SMARCA4-209ENST00000586122 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
SMARCA4-209ENST00000586122 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
SMARCA4-209ENST00000586122 PCP4P48539 62 aa3.56□□□□□ -1.84
SMARCA4-209ENST00000586122 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
SMARCA4-209ENST00000586122 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
SMARCA4-209ENST00000586122 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
SMARCA4-209ENST00000586122 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
SMARCA4-209ENST00000586122 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
SMARCA4-209ENST00000586122 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
SMARCA4-209ENST00000586122 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
SMARCA4-209ENST00000586122 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
SMARCA4-209ENST00000586122 ROMO1P60602 79 aa3.46□□□□□ -1.86
SMARCA4-209ENST00000586122 MT4P47944 62 aa3.45□□□□□ -1.86
SMARCA4-209ENST00000586122 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
SMARCA4-209ENST00000586122 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
SMARCA4-209ENST00000586122 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
SMARCA4-209ENST00000586122 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
SMARCA4-209ENST00000586122 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
SMARCA4-209ENST00000586122 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
SMARCA4-209ENST00000586122 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
SMARCA4-209ENST00000586122 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
SMARCA4-209ENST00000586122 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.88
SMARCA4-209ENST00000586122 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
SMARCA4-209ENST00000586122 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
SMARCA4-209ENST00000586122 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
SMARCA4-209ENST00000586122 MT1AP04731 61 aa3.18□□□□□ -1.9
SMARCA4-209ENST00000586122 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
SMARCA4-209ENST00000586122 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
SMARCA4-209ENST00000586122 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
SMARCA4-209ENST00000586122 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
SMARCA4-209ENST00000586122 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
SMARCA4-209ENST00000586122 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
SMARCA4-209ENST00000586122 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
SMARCA4-209ENST00000586122 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
SMARCA4-209ENST00000586122 PMAIP1Q13794 54 aa2.97□□□□□ -1.93
SMARCA4-209ENST00000586122 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
SMARCA4-209ENST00000586122 PRO0628Q9UI54 55 aa2.95□□□□□ -1.94
SMARCA4-209ENST00000586122 MT3P25713 68 aa2.91□□□□□ -1.94
SMARCA4-209ENST00000586122 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
SMARCA4-209ENST00000586122 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
SMARCA4-209ENST00000586122 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
SMARCA4-209ENST00000586122 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
SMARCA4-209ENST00000586122 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
SMARCA4-209ENST00000586122 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
SMARCA4-209ENST00000586122 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
SMARCA4-209ENST00000586122 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
SMARCA4-209ENST00000586122 H3BS24 57 aa2.69□□□□□ -1.98
SMARCA4-209ENST00000586122 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
SMARCA4-209ENST00000586122 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
SMARCA4-209ENST00000586122 A0A0A0MQY5 61 aa2.5□□□□□ -2.01
SMARCA4-209ENST00000586122 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
SMARCA4-209ENST00000586122 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
SMARCA4-209ENST00000586122 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
SMARCA4-209ENST00000586122 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
SMARCA4-209ENST00000586122 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
SMARCA4-209ENST00000586122 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
SMARCA4-209ENST00000586122 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
SMARCA4-209ENST00000586122 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
SMARCA4-209ENST00000586122 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
SMARCA4-209ENST00000586122 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
SMARCA4-209ENST00000586122 NDUFAF8A1L188 74 aa2.16□□□□□ -2.06
SMARCA4-209ENST00000586122 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SMARCA4-209ENST00000586122 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
SMARCA4-209ENST00000586122 INE1O15225 51 aa1.87□□□□□ -2.11
SMARCA4-209ENST00000586122 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
SMARCA4-209ENST00000586122 PRM1P04553 51 aa1.74□□□□□ -2.13
SMARCA4-209ENST00000586122 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
SMARCA4-209ENST00000586122 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
SMARCA4-209ENST00000586122 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 27.3 ms