RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	SMIM26	A0A096LP01	95 aa		5.57	□□□□□ -1.52
PRKAR1A-206	ENST00000585460		A8MU10	97 aa		5.57	□□□□□ -1.52
PRKAR1A-206	ENST00000585460	TNP1	P09430	55 aa		5.56	□□□□□ -1.52
PRKAR1A-206	ENST00000585460	KRTAP4-7	Q9BYR0	210 aa		5.54	□□□□□ -1.52
PRKAR1A-206	ENST00000585460	CCDC179	H3BU77	68 aa		5.51	□□□□□ -1.53
PRKAR1A-206	ENST00000585460	ATP5E	P56381	51 aa	Predicted RBP	5.51	□□□□□ -1.53
PRKAR1A-206	ENST00000585460		A0A1B0GU69	56 aa		5.49	□□□□□ -1.53
PRKAR1A-206	ENST00000585460	KRTAP5-7	Q6L8G8	165 aa		5.49	□□□□□ -1.53
PRKAR1A-206	ENST00000585460	KRTAP5-3	Q6L8H2	238 aa		5.49	□□□□□ -1.53
PRKAR1A-206	ENST00000585460	KRTAP12-3	P60328	96 aa		5.43	□□□□□ -1.54
PRKAR1A-206	ENST00000585460	KRTAP20-2	Q3LI61	65 aa		5.42	□□□□□ -1.54
PRKAR1A-206	ENST00000585460	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.39	□□□□□ -1.55
PRKAR1A-206	ENST00000585460	PRR15L	Q9BU68	103 aa		5.39	□□□□□ -1.55
PRKAR1A-206	ENST00000585460	TMEM258	P61165	79 aa		5.38	□□□□□ -1.55
PRKAR1A-206	ENST00000585460	SPRR5	A0A1B0GTR4	108 aa		5.36	□□□□□ -1.55
PRKAR1A-206	ENST00000585460	LINC01558	Q9Y6Z2	57 aa		5.31	□□□□□ -1.56
PRKAR1A-206	ENST00000585460	KRTAP12-4	P60329	112 aa		5.3	□□□□□ -1.56
PRKAR1A-206	ENST00000585460	LOC100996750	A0A140TA64	210 aa		5.25	□□□□□ -1.57
PRKAR1A-206	ENST00000585460	SYNE1	Q8NF91	8797 aa	Known RBP	5.21	□□□□□ -1.57
PRKAR1A-206	ENST00000585460	UQCR11	O14957	56 aa		5.19	□□□□□ -1.58
PRKAR1A-206	ENST00000585460		V9GYY9	64 aa		5.12	□□□□□ -1.59
PRKAR1A-206	ENST00000585460	KRTAP25-1	Q3LHN0	102 aa		5.1	□□□□□ -1.59
PRKAR1A-206	ENST00000585460	KRTAP19-4	Q3LI73	84 aa		5.09	□□□□□ -1.59
PRKAR1A-206	ENST00000585460	MIR22HG	Q0VDD5	57 aa		5.06	□□□□□ -1.6
PRKAR1A-206	ENST00000585460		Q1T7F1	81 aa		5.04	□□□□□ -1.6
PRKAR1A-206	ENST00000585460	KRTAP4-11	Q9BYQ6	195 aa		5.03	□□□□□ -1.6
PRKAR1A-206	ENST00000585460		K7ERS5	55 aa		5.01	□□□□□ -1.61
PRKAR1A-206	ENST00000585460	PSPHP1	O15172	72 aa		4.99	□□□□□ -1.61
PRKAR1A-206	ENST00000585460	KRTAP15-1	Q3LI76	137 aa		4.99	□□□□□ -1.61
PRKAR1A-206	ENST00000585460	LCE3C	Q5T5A8	94 aa		4.98	□□□□□ -1.61
PRKAR1A-206	ENST00000585460	KRTAP5-2	Q701N4	177 aa		4.97	□□□□□ -1.61
PRKAR1A-206	ENST00000585460	KRTAP6-1	Q3LI64	71 aa		4.93	□□□□□ -1.62
PRKAR1A-206	ENST00000585460	KRTAP23-1	A1A580	65 aa		4.91	□□□□□ -1.62
PRKAR1A-206	ENST00000585460	MT1A	P04731	61 aa		4.91	□□□□□ -1.62
PRKAR1A-206	ENST00000585460	RPS28	P62857	69 aa	Known RBP	4.89	□□□□□ -1.63
PRKAR1A-206	ENST00000585460	PCP4	P48539	62 aa		4.88	□□□□□ -1.63
PRKAR1A-206	ENST00000585460	KRTAP5-8	O75690	187 aa		4.87	□□□□□ -1.63
PRKAR1A-206	ENST00000585460		A6NED7	52 aa		4.86	□□□□□ -1.63
PRKAR1A-206	ENST00000585460	AHNAK	Q09666	5890 aa	Known RBP	4.84	□□□□□ -1.63
PRKAR1A-206	ENST00000585460	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.81	□□□□□ -1.64
PRKAR1A-206	ENST00000585460	KRTAP9-4	Q9BYQ2	154 aa		4.81	□□□□□ -1.64
PRKAR1A-206	ENST00000585460	MUC5AC	P98088	5654 aa		4.79	□□□□□ -1.64
PRKAR1A-206	ENST00000585460	KRTAP6-2	Q3LI66	62 aa		4.76	□□□□□ -1.65
PRKAR1A-206	ENST00000585460	KRTAP9-6	A8MVA2	160 aa		4.74	□□□□□ -1.65
PRKAR1A-206	ENST00000585460	OBSCN	Q5VST9	7968 aa		4.72	□□□□□ -1.65
PRKAR1A-206	ENST00000585460	CDC42SE1	Q9NRR8	79 aa		4.72	□□□□□ -1.65
PRKAR1A-206	ENST00000585460	KRTAP9-9	Q9BYP9	154 aa		4.65	□□□□□ -1.67
PRKAR1A-206	ENST00000585460	ROMO1	P60602	79 aa		4.63	□□□□□ -1.67
PRKAR1A-206	ENST00000585460	MT3	P25713	68 aa		4.52	□□□□□ -1.69
PRKAR1A-206	ENST00000585460	KRTAP5-1	Q6L8H4	278 aa		4.52	□□□□□ -1.69
PRKAR1A-206	ENST00000585460	BRK1	Q8WUW1	75 aa		4.28	□□□□□ -1.72
PRKAR1A-206	ENST00000585460	LCE1E	Q5T753	118 aa		4.22	□□□□□ -1.73
PRKAR1A-206	ENST00000585460	PMAIP1	Q13794	54 aa		4.05	□□□□□ -1.76
PRKAR1A-206	ENST00000585460	KRTAP4-2	Q9BYR5	136 aa		4.03	□□□□□ -1.76
PRKAR1A-206	ENST00000585460	LCE1B	Q5T7P3	118 aa		4	□□□□□ -1.77
PRKAR1A-206	ENST00000585460	KRTAP4-12	Q9BQ66	201 aa		3.96	□□□□□ -1.78
PRKAR1A-206	ENST00000585460	LCE1C	Q5T751	118 aa		3.92	□□□□□ -1.78
PRKAR1A-206	ENST00000585460	PRO0628	Q9UI54	55 aa		3.82	□□□□□ -1.8
PRKAR1A-206	ENST00000585460	PRAC1	Q96KF2	57 aa		3.8	□□□□□ -1.8
PRKAR1A-206	ENST00000585460	KTN1-AS1	Q86SY8	53 aa		3.64	□□□□□ -1.83
PRKAR1A-206	ENST00000585460		H3BS24	57 aa		3.56	□□□□□ -1.84
PRKAR1A-206	ENST00000585460	KRTAP5-11	Q6L8G4	156 aa		3.55	□□□□□ -1.84
PRKAR1A-206	ENST00000585460	LCE1F	Q5T754	118 aa		3.53	□□□□□ -1.84
PRKAR1A-206	ENST00000585460	LCE3D	Q9BYE3	92 aa		3.53	□□□□□ -1.84
PRKAR1A-206	ENST00000585460	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.52	□□□□□ -1.85
PRKAR1A-206	ENST00000585460	SVIP	Q8NHG7	77 aa		3.47	□□□□□ -1.85
PRKAR1A-206	ENST00000585460	LUZP6	Q538Z0	58 aa		3.31	□□□□□ -1.88
PRKAR1A-206	ENST00000585460	PHGR1	C9JFL3	82 aa		3.3	□□□□□ -1.88
PRKAR1A-206	ENST00000585460	LCE3E	Q5T5B0	92 aa		3.27	□□□□□ -1.89
PRKAR1A-206	ENST00000585460	KRTAP21-2	Q3LI59	83 aa		3.26	□□□□□ -1.89
PRKAR1A-206	ENST00000585460	KRTAP4-4	Q9BYR3	166 aa		3.04	□□□□□ -1.92
PRKAR1A-206	ENST00000585460	MUC19	Q7Z5P9	8384 aa		2.92	□□□□□ -1.94
PRKAR1A-206	ENST00000585460	NDUFAF8	A1L188	74 aa		2.66	□□□□□ -1.98
PRKAR1A-206	ENST00000585460	KRTAP21-1	Q3LI58	79 aa		2.51	□□□□□ -2.01
PRKAR1A-206	ENST00000585460	PRM1	P04553	51 aa		2.34	□□□□□ -2.03
PRKAR1A-206	ENST00000585460	INE1	O15225	51 aa		2.22	□□□□□ -2.05
PRKAR1A-206	ENST00000585460		A0A0A0MQY5	61 aa		2.2	□□□□□ -2.06
PRKAR1A-206	ENST00000585460	MUC16	Q8WXI7	14507 aa		2.08	□□□□□ -2.08

Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms