RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 MT1EP04732 61 aa8.59□□□□□ -1.03
TRAPPC8-213ENST00000584876 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
TRAPPC8-213ENST00000584876 LCE1DQ5T752 114 aa8.43□□□□□ -1.06
TRAPPC8-213ENST00000584876 BRK1Q8WUW1 75 aa8.42□□□□□ -1.06
TRAPPC8-213ENST00000584876 MT1GP13640 62 aa8.34□□□□□ -1.07
TRAPPC8-213ENST00000584876 KRTAP19-5Q3LI72 72 aa8.32□□□□□ -1.08
TRAPPC8-213ENST00000584876 HMCN1Q96RW7 5635 aa8.3□□□□□ -1.08
TRAPPC8-213ENST00000584876 LCE4AQ5TA78 99 aa8.3□□□□□ -1.08
TRAPPC8-213ENST00000584876 MT4P47944 62 aa8.29□□□□□ -1.08
TRAPPC8-213ENST00000584876 PP632Q6XCG6 107 aa8.29□□□□□ -1.08
TRAPPC8-213ENST00000584876 MT1MQ8N339 61 aa8.21□□□□□ -1.1
TRAPPC8-213ENST00000584876 AHNAK2Q8IVF2 5795 aa8.18□□□□□ -1.1
TRAPPC8-213ENST00000584876 C10orf95Q9H7T3 257 aa8.15□□□□□ -1.1
TRAPPC8-213ENST00000584876 TNP1P09430 55 aa8.14□□□□□ -1.11
TRAPPC8-213ENST00000584876 MT1LQ93083 61 aa8.14□□□□□ -1.11
TRAPPC8-213ENST00000584876 ROMO1P60602 79 aa8.09□□□□□ -1.11
TRAPPC8-213ENST00000584876 KRTAP5-4Q6L8H1 288 aa8.06□□□□□ -1.12
TRAPPC8-213ENST00000584876 KRTAP4-3Q9BYR4 195 aa8.04□□□□□ -1.12
TRAPPC8-213ENST00000584876 PRO0628Q9UI54 55 aa8.04□□□□□ -1.12
TRAPPC8-213ENST00000584876 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
TRAPPC8-213ENST00000584876 KRTAP5-10Q6L8G5 202 aa8.03□□□□□ -1.12
TRAPPC8-213ENST00000584876 KRTAP4-6Q9BYQ5 205 aa7.99□□□□□ -1.13
TRAPPC8-213ENST00000584876 PMAIP1Q13794 54 aa7.98□□□□□ -1.13
TRAPPC8-213ENST00000584876 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
TRAPPC8-213ENST00000584876 KRTAP23-1A1A580 65 aa7.78□□□□□ -1.16
TRAPPC8-213ENST00000584876 KRTAP5-7Q6L8G8 165 aa7.78□□□□□ -1.16
TRAPPC8-213ENST00000584876 KRTAP5-3Q6L8H2 238 aa7.76□□□□□ -1.17
TRAPPC8-213ENST00000584876 KRTAP4-7Q9BYR0 210 aa7.73□□□□□ -1.17
TRAPPC8-213ENST00000584876 KRTAP20-2Q3LI61 65 aa7.65□□□□□ -1.18
TRAPPC8-213ENST00000584876 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
TRAPPC8-213ENST00000584876 KRTAP5-5Q701N2 237 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC8-213ENST00000584876 SPRR5A0A1B0GTR4 108 aa7.55□□□□□ -1.2
TRAPPC8-213ENST00000584876 KTN1-AS1Q86SY8 53 aa7.5□□□□□ -1.21
TRAPPC8-213ENST00000584876 KRTAP12-4P60329 112 aa7.48□□□□□ -1.21
TRAPPC8-213ENST00000584876 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
TRAPPC8-213ENST00000584876 PRAC1Q96KF2 57 aa7.37□□□□□ -1.23
TRAPPC8-213ENST00000584876 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
TRAPPC8-213ENST00000584876 SYNE1Q8NF91 8797 aaKnown RBP7.31□□□□□ -1.24
TRAPPC8-213ENST00000584876 KRTAP15-1Q3LI76 137 aa7.26□□□□□ -1.25
TRAPPC8-213ENST00000584876 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
TRAPPC8-213ENST00000584876 KRTAP4-11Q9BYQ6 195 aa7.08□□□□□ -1.28
TRAPPC8-213ENST00000584876 KRTAP5-2Q701N4 177 aa6.99□□□□□ -1.29
TRAPPC8-213ENST00000584876 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.3
TRAPPC8-213ENST00000584876 MT1AP04731 61 aa6.92□□□□□ -1.3
TRAPPC8-213ENST00000584876 KRTAP6-1Q3LI64 71 aa6.91□□□□□ -1.3
TRAPPC8-213ENST00000584876 KRTAP5-8O75690 187 aa6.85□□□□□ -1.31
TRAPPC8-213ENST00000584876 AHNAKQ09666 5890 aaKnown RBP6.8□□□□□ -1.32
TRAPPC8-213ENST00000584876 MUC5ACP98088 5654 aa6.78□□□□□ -1.32
TRAPPC8-213ENST00000584876 MUC5BQ9HC84 5762 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC8-213ENST00000584876 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
TRAPPC8-213ENST00000584876 KRTAP6-2Q3LI66 62 aa6.68□□□□□ -1.34
TRAPPC8-213ENST00000584876 OBSCNQ5VST9 7968 aa6.66□□□□□ -1.34
TRAPPC8-213ENST00000584876 KRTAP9-9Q9BYP9 154 aa6.59□□□□□ -1.35
TRAPPC8-213ENST00000584876 KRTAP9-6A8MVA2 160 aa6.58□□□□□ -1.36
TRAPPC8-213ENST00000584876 H3BS24 57 aa6.56□□□□□ -1.36
TRAPPC8-213ENST00000584876 KRTAP4-12Q9BQ66 201 aa6.48□□□□□ -1.37
TRAPPC8-213ENST00000584876 MT3P25713 68 aa6.35□□□□□ -1.39
TRAPPC8-213ENST00000584876 KRTAP5-1Q6L8H4 278 aa6.35□□□□□ -1.39
TRAPPC8-213ENST00000584876 LUZP6Q538Z0 58 aa6.32□□□□□ -1.4
TRAPPC8-213ENST00000584876 LCE1EQ5T753 118 aa5.91□□□□□ -1.46
TRAPPC8-213ENST00000584876 NDUFAF8A1L188 74 aa5.72□□□□□ -1.49
TRAPPC8-213ENST00000584876 LCE1BQ5T7P3 118 aa5.64□□□□□ -1.51
TRAPPC8-213ENST00000584876 KRTAP4-2Q9BYR5 136 aa5.64□□□□□ -1.51
TRAPPC8-213ENST00000584876 LCE1CQ5T751 118 aa5.49□□□□□ -1.53
TRAPPC8-213ENST00000584876 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
TRAPPC8-213ENST00000584876 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
TRAPPC8-213ENST00000584876 KRTAP5-11Q6L8G4 156 aa5.02□□□□□ -1.61
TRAPPC8-213ENST00000584876 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
TRAPPC8-213ENST00000584876 LCE1FQ5T754 118 aa4.97□□□□□ -1.61
TRAPPC8-213ENST00000584876 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC8-213ENST00000584876 INE1O15225 51 aa4.82□□□□□ -1.64
TRAPPC8-213ENST00000584876 PHGR1C9JFL3 82 aa4.71□□□□□ -1.66
TRAPPC8-213ENST00000584876 KRTAP21-2Q3LI59 83 aa4.54□□□□□ -1.68
TRAPPC8-213ENST00000584876 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
TRAPPC8-213ENST00000584876 PRM1P04553 51 aa4.14□□□□□ -1.75
TRAPPC8-213ENST00000584876 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
TRAPPC8-213ENST00000584876 KRTAP21-1Q3LI58 79 aa3.58□□□□□ -1.84
TRAPPC8-213ENST00000584876 MUC16Q8WXI7 14507 aa2.94□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 53.3 ms