RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
CASC3-209ENST00000583902 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
CASC3-209ENST00000583902 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.83
CASC3-209ENST00000583902 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
CASC3-209ENST00000583902 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
CASC3-209ENST00000583902 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
CASC3-209ENST00000583902 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
CASC3-209ENST00000583902 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
CASC3-209ENST00000583902 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
CASC3-209ENST00000583902 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
CASC3-209ENST00000583902 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
CASC3-209ENST00000583902 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
CASC3-209ENST00000583902 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
CASC3-209ENST00000583902 SVIPQ8NHG7 77 aa3.49□□□□□ -1.85
CASC3-209ENST00000583902 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
CASC3-209ENST00000583902 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
CASC3-209ENST00000583902 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
CASC3-209ENST00000583902 KRTAP19-5Q3LI72 72 aa3.4□□□□□ -1.87
CASC3-209ENST00000583902 KRTAP19-7Q3SYF9 63 aa3.4□□□□□ -1.87
CASC3-209ENST00000583902 NEBP20929 6669 aa3.39□□□□□ -1.87
CASC3-209ENST00000583902 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
CASC3-209ENST00000583902 MT1EP04732 61 aa3.37□□□□□ -1.87
CASC3-209ENST00000583902 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
CASC3-209ENST00000583902 MT1GP13640 62 aa3.3□□□□□ -1.88
CASC3-209ENST00000583902 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
CASC3-209ENST00000583902 MT1LQ93083 61 aa3.29□□□□□ -1.88
CASC3-209ENST00000583902 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
CASC3-209ENST00000583902 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
CASC3-209ENST00000583902 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
CASC3-209ENST00000583902 SPRR2EP22531 72 aa3.24□□□□□ -1.89
CASC3-209ENST00000583902 SPRR2BP35325 72 aa3.24□□□□□ -1.89
CASC3-209ENST00000583902 SPRR2AP35326 72 aa3.24□□□□□ -1.89
CASC3-209ENST00000583902 KMT2DO14686 5537 aa3.23□□□□□ -1.89
CASC3-209ENST00000583902 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
CASC3-209ENST00000583902 MT1MQ8N339 61 aa3.17□□□□□ -1.9
CASC3-209ENST00000583902 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
CASC3-209ENST00000583902 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.91
CASC3-209ENST00000583902 SPRR2DP22532 72 aa3.14□□□□□ -1.91
CASC3-209ENST00000583902 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
CASC3-209ENST00000583902 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
CASC3-209ENST00000583902 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CASC3-209ENST00000583902 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
CASC3-209ENST00000583902 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
CASC3-209ENST00000583902 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
CASC3-209ENST00000583902 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
CASC3-209ENST00000583902 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
CASC3-209ENST00000583902 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
CASC3-209ENST00000583902 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
CASC3-209ENST00000583902 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
CASC3-209ENST00000583902 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
CASC3-209ENST00000583902 MT1AP04731 61 aa2.83□□□□□ -1.96
CASC3-209ENST00000583902 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
CASC3-209ENST00000583902 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
CASC3-209ENST00000583902 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
CASC3-209ENST00000583902 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
CASC3-209ENST00000583902 MT4P47944 62 aa2.67□□□□□ -1.98
CASC3-209ENST00000583902 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
CASC3-209ENST00000583902 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
CASC3-209ENST00000583902 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
CASC3-209ENST00000583902 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
CASC3-209ENST00000583902 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
CASC3-209ENST00000583902 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
CASC3-209ENST00000583902 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
CASC3-209ENST00000583902 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
CASC3-209ENST00000583902 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
CASC3-209ENST00000583902 INE1O15225 51 aa2.39□□□□□ -2.03
CASC3-209ENST00000583902 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
CASC3-209ENST00000583902 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
CASC3-209ENST00000583902 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
CASC3-209ENST00000583902 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
CASC3-209ENST00000583902 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
CASC3-209ENST00000583902 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
CASC3-209ENST00000583902 PRM1P04553 51 aa1.9□□□□□ -2.11
CASC3-209ENST00000583902 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
CASC3-209ENST00000583902 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CASC3-209ENST00000583902 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
CASC3-209ENST00000583902 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
CASC3-209ENST00000583902 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 171.9 ms