RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 TNXBP22105 4242 aa3.39□□□□□ -1.87
MSI2-217ENST00000583705 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
MSI2-217ENST00000583705 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
MSI2-217ENST00000583705 RYR3Q15413 4870 aa3.31□□□□□ -1.88
MSI2-217ENST00000583705 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
MSI2-217ENST00000583705 LRP2P98164 4655 aa3.19□□□□□ -1.9
MSI2-217ENST00000583705 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
MSI2-217ENST00000583705 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
MSI2-217ENST00000583705 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
MSI2-217ENST00000583705 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
MSI2-217ENST00000583705 MT1AP04731 61 aa3.11□□□□□ -1.91
MSI2-217ENST00000583705 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
MSI2-217ENST00000583705 MUC17Q685J3 4493 aa3.03□□□□□ -1.92
MSI2-217ENST00000583705 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
MSI2-217ENST00000583705 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
MSI2-217ENST00000583705 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
MSI2-217ENST00000583705 KMT2CQ8NEZ4 4911 aaKnown RBP2.99□□□□□ -1.93
MSI2-217ENST00000583705 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
MSI2-217ENST00000583705 LCE2AQ5TA79 106 aaPredicted RBP2.97□□□□□ -1.93
MSI2-217ENST00000583705 KRTAP19-7Q3SYF9 63 aa2.97□□□□□ -1.93
MSI2-217ENST00000583705 HERC2O95714 4834 aa2.96□□□□□ -1.94
MSI2-217ENST00000583705 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
MSI2-217ENST00000583705 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
MSI2-217ENST00000583705 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
MSI2-217ENST00000583705 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
MSI2-217ENST00000583705 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
MSI2-217ENST00000583705 HYDINQ4G0P3 5121 aa2.93□□□□□ -1.94
MSI2-217ENST00000583705 PCLOQ9Y6V0 5065 aa2.85□□□□□ -1.95
MSI2-217ENST00000583705 RYR2Q92736 4967 aa2.83□□□□□ -1.96
MSI2-217ENST00000583705 HERC1Q15751 4861 aa2.81□□□□□ -1.96
MSI2-217ENST00000583705 KIAA1109Q2LD37 5005 aa2.79□□□□□ -1.96
MSI2-217ENST00000583705 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
MSI2-217ENST00000583705 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
MSI2-217ENST00000583705 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
MSI2-217ENST00000583705 EPPK1P58107 5090 aaKnown RBP2.73□□□□□ -1.97
MSI2-217ENST00000583705 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
MSI2-217ENST00000583705 MUC2Q02817 5179 aa2.7□□□□□ -1.98
MSI2-217ENST00000583705 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
MSI2-217ENST00000583705 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
MSI2-217ENST00000583705 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
MSI2-217ENST00000583705 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
MSI2-217ENST00000583705 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
MSI2-217ENST00000583705 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
MSI2-217ENST00000583705 ABCA13Q86UQ4 5058 aa2.59□□□□□ -2
MSI2-217ENST00000583705 FAT4Q6V0I7 4981 aa2.5□□□□□ -2.01
MSI2-217ENST00000583705 UBR4Q5T4S7 5183 aa2.46□□□□□ -2.02
MSI2-217ENST00000583705 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
MSI2-217ENST00000583705 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
MSI2-217ENST00000583705 RNF213Q63HN8 5207 aa2.36□□□□□ -2.03
MSI2-217ENST00000583705 KMT2DO14686 5537 aa2.34□□□□□ -2.03
MSI2-217ENST00000583705 FCGBPQ9Y6R7 5405 aaPredicted RBP2.29□□□□□ -2.04
MSI2-217ENST00000583705 NEBP20929 6669 aa2.24□□□□□ -2.05
MSI2-217ENST00000583705 KRTAP5-9P26371 169 aa2.17□□□□□ -2.06
MSI2-217ENST00000583705 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
MSI2-217ENST00000583705 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
MSI2-217ENST00000583705 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
MSI2-217ENST00000583705 USH2AO75445 5202 aa2.08□□□□□ -2.08
MSI2-217ENST00000583705 SSPOA2VEC9 5147 aa2.07□□□□□ -2.08
MSI2-217ENST00000583705 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
MSI2-217ENST00000583705 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
MSI2-217ENST00000583705 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
MSI2-217ENST00000583705 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.12
MSI2-217ENST00000583705 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
MSI2-217ENST00000583705 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
MSI2-217ENST00000583705 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
MSI2-217ENST00000583705 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
MSI2-217ENST00000583705 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
MSI2-217ENST00000583705 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
MSI2-217ENST00000583705 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
MSI2-217ENST00000583705 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
MSI2-217ENST00000583705 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.19
MSI2-217ENST00000583705 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.2
MSI2-217ENST00000583705 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
MSI2-217ENST00000583705 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
MSI2-217ENST00000583705 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
MSI2-217ENST00000583705 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
MSI2-217ENST00000583705 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
MSI2-217ENST00000583705 KRTAP5-7Q6L8G8 165 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 107.6 ms