RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 UQCR11O14957 56 aa4.4□□□□□ -1.71
SMARCD2-209ENST00000581832 MT1MQ8N339 61 aa4.39□□□□□ -1.71
SMARCD2-209ENST00000581832 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
SMARCD2-209ENST00000581832 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
SMARCD2-209ENST00000581832 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
SMARCD2-209ENST00000581832 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
SMARCD2-209ENST00000581832 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
SMARCD2-209ENST00000581832 Q1T7F1 81 aa4.28□□□□□ -1.72
SMARCD2-209ENST00000581832 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
SMARCD2-209ENST00000581832 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
SMARCD2-209ENST00000581832 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
SMARCD2-209ENST00000581832 H3BS24 57 aa4.25□□□□□ -1.73
SMARCD2-209ENST00000581832 PSPHP1O15172 72 aa4.25□□□□□ -1.73
SMARCD2-209ENST00000581832 V9GYY9 64 aa4.24□□□□□ -1.73
SMARCD2-209ENST00000581832 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
SMARCD2-209ENST00000581832 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
SMARCD2-209ENST00000581832 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
SMARCD2-209ENST00000581832 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
SMARCD2-209ENST00000581832 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
SMARCD2-209ENST00000581832 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
SMARCD2-209ENST00000581832 K7ERS5 55 aa4.15□□□□□ -1.75
SMARCD2-209ENST00000581832 MT4P47944 62 aa4.14□□□□□ -1.75
SMARCD2-209ENST00000581832 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
SMARCD2-209ENST00000581832 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
SMARCD2-209ENST00000581832 A6NED7 52 aa4.07□□□□□ -1.76
SMARCD2-209ENST00000581832 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
SMARCD2-209ENST00000581832 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
SMARCD2-209ENST00000581832 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
SMARCD2-209ENST00000581832 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
SMARCD2-209ENST00000581832 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
SMARCD2-209ENST00000581832 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
SMARCD2-209ENST00000581832 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
SMARCD2-209ENST00000581832 ROMO1P60602 79 aa3.94□□□□□ -1.78
SMARCD2-209ENST00000581832 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
SMARCD2-209ENST00000581832 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
SMARCD2-209ENST00000581832 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
SMARCD2-209ENST00000581832 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
SMARCD2-209ENST00000581832 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
SMARCD2-209ENST00000581832 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
SMARCD2-209ENST00000581832 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
SMARCD2-209ENST00000581832 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
SMARCD2-209ENST00000581832 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
SMARCD2-209ENST00000581832 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
SMARCD2-209ENST00000581832 MT1AP04731 61 aa3.75□□□□□ -1.81
SMARCD2-209ENST00000581832 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
SMARCD2-209ENST00000581832 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
SMARCD2-209ENST00000581832 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
SMARCD2-209ENST00000581832 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
SMARCD2-209ENST00000581832 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
SMARCD2-209ENST00000581832 PRO0628Q9UI54 55 aa3.55□□□□□ -1.84
SMARCD2-209ENST00000581832 PMAIP1Q13794 54 aa3.52□□□□□ -1.85
SMARCD2-209ENST00000581832 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
SMARCD2-209ENST00000581832 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
SMARCD2-209ENST00000581832 MT3P25713 68 aa3.41□□□□□ -1.86
SMARCD2-209ENST00000581832 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
SMARCD2-209ENST00000581832 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
SMARCD2-209ENST00000581832 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
SMARCD2-209ENST00000581832 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
SMARCD2-209ENST00000581832 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
SMARCD2-209ENST00000581832 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
SMARCD2-209ENST00000581832 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
SMARCD2-209ENST00000581832 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
SMARCD2-209ENST00000581832 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
SMARCD2-209ENST00000581832 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
SMARCD2-209ENST00000581832 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
SMARCD2-209ENST00000581832 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
SMARCD2-209ENST00000581832 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
SMARCD2-209ENST00000581832 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
SMARCD2-209ENST00000581832 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
SMARCD2-209ENST00000581832 LCE1FQ5T754 118 aa2.56□□□□□ -2
SMARCD2-209ENST00000581832 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
SMARCD2-209ENST00000581832 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
SMARCD2-209ENST00000581832 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
SMARCD2-209ENST00000581832 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
SMARCD2-209ENST00000581832 INE1O15225 51 aa2.12□□□□□ -2.07
SMARCD2-209ENST00000581832 PRM1P04553 51 aa2.02□□□□□ -2.09
SMARCD2-209ENST00000581832 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SMARCD2-209ENST00000581832 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 71.5 ms