RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MT1MQ8N339 61 aa-0.43□□□□□ -2.48
SMCHD1-206ENST00000581631 MYO15AQ9UKN7 3530 aa-0.43□□□□□ -2.48
SMCHD1-206ENST00000581631 BOD1L1Q8NFC6 3051 aa-0.44□□□□□ -2.48
SMCHD1-206ENST00000581631 IQGAP2Q13576 1575 aa-0.44□□□□□ -2.48
SMCHD1-206ENST00000581631 MT2AP02795 61 aa-0.44□□□□□ -2.48
SMCHD1-206ENST00000581631 TFF3Q07654 80 aa-0.44□□□□□ -2.48
SMCHD1-206ENST00000581631 CEP350Q5VT06 3117 aa-0.44□□□□□ -2.48
SMCHD1-206ENST00000581631 PCNTO95613 3336 aa-0.46□□□□□ -2.48
SMCHD1-206ENST00000581631 NDUFA1O15239 70 aa-0.46□□□□□ -2.48
SMCHD1-206ENST00000581631 MT1GP13640 62 aa-0.46□□□□□ -2.48
SMCHD1-206ENST00000581631 SNRPGP15A8MWD9 76 aa-0.47□□□□□ -2.48
SMCHD1-206ENST00000581631 DEFB4AO15263 64 aa-0.47□□□□□ -2.48
SMCHD1-206ENST00000581631 WDFY3Q8IZQ1 3526 aa-0.47□□□□□ -2.48
SMCHD1-206ENST00000581631 MUC3AQ02505 3323 aa-0.47□□□□□ -2.48
SMCHD1-206ENST00000581631 DMDP11532 3685 aa-0.47□□□□□ -2.48
SMCHD1-206ENST00000581631 XIRP2A4UGR9 3374 aa-0.47□□□□□ -2.49
SMCHD1-206ENST00000581631 CENPEQ02224 2701 aa-0.48□□□□□ -2.49
SMCHD1-206ENST00000581631 SPEGQ15772 3267 aa-0.48□□□□□ -2.49
SMCHD1-206ENST00000581631 MT1BP07438 61 aa-0.48□□□□□ -2.49
SMCHD1-206ENST00000581631 WDFY4Q6ZS81 3184 aa-0.49□□□□□ -2.49
SMCHD1-206ENST00000581631 SZT2Q5T011 3432 aa-0.5□□□□□ -2.49
SMCHD1-206ENST00000581631 RPS29P62273 56 aaKnown RBP-0.5□□□□□ -2.49
SMCHD1-206ENST00000581631 ATP7AQ04656 1500 aa-0.5□□□□□ -2.49
SMCHD1-206ENST00000581631 SAMD9LQ8IVG5 1584 aa-0.51□□□□□ -2.49
SMCHD1-206ENST00000581631 MROH2BQ7Z745 1585 aa-0.53□□□□□ -2.49
SMCHD1-206ENST00000581631 DNAH12Q6ZR08 3092 aa-0.53□□□□□ -2.49
SMCHD1-206ENST00000581631 LINC01590Q5TEZ4 76 aa-0.53□□□□□ -2.49
SMCHD1-206ENST00000581631 USP34Q70CQ2 3546 aa-0.54□□□□□ -2.5
SMCHD1-206ENST00000581631 DCHS1Q96JQ0 3298 aa-0.54□□□□□ -2.5
SMCHD1-206ENST00000581631 DUOX1Q9NRD9 1551 aa-0.54□□□□□ -2.5
SMCHD1-206ENST00000581631 MKI67P46013 3256 aaKnown RBP-0.55□□□□□ -2.5
SMCHD1-206ENST00000581631 KRTAP19-6Q3LI70 58 aa-0.55□□□□□ -2.5
SMCHD1-206ENST00000581631 TOMM7Q9P0U1 55 aa-0.55□□□□□ -2.5
SMCHD1-206ENST00000581631 RHPN1-AS1Q9BWJ2 59 aa-0.56□□□□□ -2.5
SMCHD1-206ENST00000581631 UNC80Q8N2C7 3258 aa-0.56□□□□□ -2.5
SMCHD1-206ENST00000581631 EP400Q96L91 3159 aa-0.56□□□□□ -2.5
SMCHD1-206ENST00000581631 TOMM5Q8N4H5 51 aa-0.57□□□□□ -2.5
SMCHD1-206ENST00000581631 TOP2AP11388 1531 aaKnown RBP-0.59□□□□□ -2.5
SMCHD1-206ENST00000581631 MT1FP04733 61 aa-0.59□□□□□ -2.5
SMCHD1-206ENST00000581631 LOC400499M0QZD8 3231 aa-0.59□□□□□ -2.5
SMCHD1-206ENST00000581631 GCC2Q8IWJ2 1684 aa-0.61□□□□□ -2.51
SMCHD1-206ENST00000581631 RPL39P62891 51 aaKnown RBP-0.61□□□□□ -2.51
SMCHD1-206ENST00000581631 ASPMQ8IZT6 3477 aa-0.61□□□□□ -2.51
SMCHD1-206ENST00000581631 DEFB133Q30KQ1 61 aa-0.62□□□□□ -2.51
SMCHD1-206ENST00000581631 CFAP47Q6ZTR5 3102 aa-0.62□□□□□ -2.51
SMCHD1-206ENST00000581631 DNAH14Q0VDD8 3507 aa-0.62□□□□□ -2.51
SMCHD1-206ENST00000581631 CD52P31358 61 aa-0.64□□□□□ -2.51
SMCHD1-206ENST00000581631 DEFB124Q8NES8 71 aa-0.64□□□□□ -2.51
SMCHD1-206ENST00000581631 RPL39LQ96EH5 51 aaKnown RBP-0.65□□□□□ -2.51
SMCHD1-206ENST00000581631 HTN1P15515 57 aa-0.66□□□□□ -2.52
SMCHD1-206ENST00000581631 TTTY10Q9BZA0 68 aa-0.67□□□□□ -2.52
SMCHD1-206ENST00000581631 BRCA2P51587 3418 aa-0.68□□□□□ -2.52
SMCHD1-206ENST00000581631 A0A096LNI7 61 aa-0.68□□□□□ -2.52
SMCHD1-206ENST00000581631 VCANP13611 3396 aa-0.69□□□□□ -2.52
SMCHD1-206ENST00000581631 H3BUX3 64 aa-0.69□□□□□ -2.52
SMCHD1-206ENST00000581631 CENPFP49454 3210 aa-0.71□□□□□ -2.52
SMCHD1-206ENST00000581631 CDH23Q9H251 3354 aa-0.74□□□□□ -2.53
SMCHD1-206ENST00000581631 K7EIM0 57 aa-0.75□□□□□ -2.53
SMCHD1-206ENST00000581631 VPS13AQ96RL7 3174 aa-0.75□□□□□ -2.53
SMCHD1-206ENST00000581631 SNRPGP62308 76 aaKnown RBP-0.76□□□□□ -2.53
SMCHD1-206ENST00000581631 DEFB104AQ8WTQ1 72 aa-0.77□□□□□ -2.53
SMCHD1-206ENST00000581631 PRCDQ00LT1 54 aa-0.79□□□□□ -2.54
SMCHD1-206ENST00000581631 ARHGAP5-AS1Q96IT6 56 aa-0.79□□□□□ -2.54
SMCHD1-206ENST00000581631 KRTAP19-2Q3LHN2 52 aa-0.8□□□□□ -2.54
SMCHD1-206ENST00000581631 UTRNP46939 3433 aa-0.8□□□□□ -2.54
SMCHD1-206ENST00000581631 LINC01556Q5JQF7 62 aa-0.81□□□□□ -2.54
SMCHD1-206ENST00000581631 TMEM167AQ8TBQ9 72 aa-0.85□□□□□ -2.55
SMCHD1-206ENST00000581631 GOLGB1Q14789 3259 aaKnown RBP-0.9□□□□□ -2.55
SMCHD1-206ENST00000581631 A0A096LPF7 62 aa-0.9□□□□□ -2.55
SMCHD1-206ENST00000581631 Q9Y3F1 56 aa-0.9□□□□□ -2.55
SMCHD1-206ENST00000581631 APELAP0DMC3 54 aa-0.93□□□□□ -2.56
SMCHD1-206ENST00000581631 RPL39P5Q59GN2 51 aa-0.94□□□□□ -2.56
SMCHD1-206ENST00000581631 DEFB108AA8MXU0 73 aa-0.98□□□□□ -2.57
SMCHD1-206ENST00000581631 H3BSH0 61 aa-0.98□□□□□ -2.57
SMCHD1-206ENST00000581631 HTN3P15516 51 aa-1□□□□□ -2.57
SMCHD1-206ENST00000581631 COX14Q96I36 57 aa-1.04□□□□□ -2.58
SMCHD1-206ENST00000581631 DEFB108BQ8NET1 73 aa-1.14□□□□□ -2.59
SMCHD1-206ENST00000581631 STATHP02808 62 aa-1.33□□□□□ -2.62
Retrieved 78 of 20,778 RNA–protein pairs in 439.5 ms