RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 MT1MQ8N339 61 aa5.16□□□□□ -1.58
SMARCE1-216ENST00000580419 MT1LQ93083 61 aa5.15□□□□□ -1.59
SMARCE1-216ENST00000580419 TNP1P09430 55 aa5.12□□□□□ -1.59
SMARCE1-216ENST00000580419 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
SMARCE1-216ENST00000580419 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
SMARCE1-216ENST00000580419 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
SMARCE1-216ENST00000580419 A8MU10 97 aa5.05□□□□□ -1.6
SMARCE1-216ENST00000580419 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
SMARCE1-216ENST00000580419 PRR15LQ9BU68 103 aa5.03□□□□□ -1.6
SMARCE1-216ENST00000580419 ATP5EP56381 51 aaPredicted RBP5.02□□□□□ -1.61
SMARCE1-216ENST00000580419 ANAPC13Q9BS18 74 aa4.99□□□□□ -1.61
SMARCE1-216ENST00000580419 MT4P47944 62 aa4.98□□□□□ -1.61
SMARCE1-216ENST00000580419 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
SMARCE1-216ENST00000580419 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
SMARCE1-216ENST00000580419 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
SMARCE1-216ENST00000580419 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
SMARCE1-216ENST00000580419 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
SMARCE1-216ENST00000580419 CCDC179H3BU77 68 aa4.86□□□□□ -1.63
SMARCE1-216ENST00000580419 UQCR11O14957 56 aa4.86□□□□□ -1.63
SMARCE1-216ENST00000580419 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
SMARCE1-216ENST00000580419 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
SMARCE1-216ENST00000580419 KRTAP25-1Q3LHN0 102 aa4.81□□□□□ -1.64
SMARCE1-216ENST00000580419 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
SMARCE1-216ENST00000580419 TMEM258P61165 79 aa4.79□□□□□ -1.64
SMARCE1-216ENST00000580419 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
SMARCE1-216ENST00000580419 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
SMARCE1-216ENST00000580419 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
SMARCE1-216ENST00000580419 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
SMARCE1-216ENST00000580419 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
SMARCE1-216ENST00000580419 K7ERS5 55 aa4.68□□□□□ -1.66
SMARCE1-216ENST00000580419 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
SMARCE1-216ENST00000580419 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
SMARCE1-216ENST00000580419 V9GYY9 64 aa4.61□□□□□ -1.67
SMARCE1-216ENST00000580419 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
SMARCE1-216ENST00000580419 SVIPQ8NHG7 77 aa4.56□□□□□ -1.68
SMARCE1-216ENST00000580419 Q1T7F1 81 aa4.54□□□□□ -1.68
SMARCE1-216ENST00000580419 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
SMARCE1-216ENST00000580419 PSPHP1O15172 72 aa4.45□□□□□ -1.7
SMARCE1-216ENST00000580419 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
SMARCE1-216ENST00000580419 MT1AP04731 61 aa4.41□□□□□ -1.7
SMARCE1-216ENST00000580419 CDC42SE1Q9NRR8 79 aa4.38□□□□□ -1.71
SMARCE1-216ENST00000580419 A6NED7 52 aa4.33□□□□□ -1.72
SMARCE1-216ENST00000580419 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
SMARCE1-216ENST00000580419 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
SMARCE1-216ENST00000580419 ROMO1P60602 79 aa4.3□□□□□ -1.72
SMARCE1-216ENST00000580419 RPS28P62857 69 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-216ENST00000580419 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
SMARCE1-216ENST00000580419 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
SMARCE1-216ENST00000580419 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
SMARCE1-216ENST00000580419 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
SMARCE1-216ENST00000580419 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SMARCE1-216ENST00000580419 PCP4P48539 62 aa4.15□□□□□ -1.75
SMARCE1-216ENST00000580419 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
SMARCE1-216ENST00000580419 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
SMARCE1-216ENST00000580419 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
SMARCE1-216ENST00000580419 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
SMARCE1-216ENST00000580419 MT3P25713 68 aa4.05□□□□□ -1.76
SMARCE1-216ENST00000580419 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
SMARCE1-216ENST00000580419 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
SMARCE1-216ENST00000580419 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
SMARCE1-216ENST00000580419 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
SMARCE1-216ENST00000580419 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
SMARCE1-216ENST00000580419 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
SMARCE1-216ENST00000580419 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
SMARCE1-216ENST00000580419 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
SMARCE1-216ENST00000580419 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
SMARCE1-216ENST00000580419 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
SMARCE1-216ENST00000580419 PRO0628Q9UI54 55 aa2.96□□□□□ -1.94
SMARCE1-216ENST00000580419 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
SMARCE1-216ENST00000580419 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
SMARCE1-216ENST00000580419 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
SMARCE1-216ENST00000580419 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
SMARCE1-216ENST00000580419 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
SMARCE1-216ENST00000580419 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
SMARCE1-216ENST00000580419 PRM1P04553 51 aa2.13□□□□□ -2.07
SMARCE1-216ENST00000580419 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
SMARCE1-216ENST00000580419 INE1O15225 51 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms