RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 CAMK2N1Q7Z7J9 78 aa3.57□□□□□ -1.84
CDK5RAP3-211ENST00000578996 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
CDK5RAP3-211ENST00000578996 A8MU10 97 aa3.51□□□□□ -1.85
CDK5RAP3-211ENST00000578996 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
CDK5RAP3-211ENST00000578996 A0A0D9SG42 100 aa3.48□□□□□ -1.85
CDK5RAP3-211ENST00000578996 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
CDK5RAP3-211ENST00000578996 K7ERS5 55 aa3.44□□□□□ -1.86
CDK5RAP3-211ENST00000578996 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
CDK5RAP3-211ENST00000578996 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
CDK5RAP3-211ENST00000578996 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
CDK5RAP3-211ENST00000578996 MT1EP04732 61 aa3.43□□□□□ -1.86
CDK5RAP3-211ENST00000578996 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
CDK5RAP3-211ENST00000578996 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
CDK5RAP3-211ENST00000578996 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
CDK5RAP3-211ENST00000578996 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
CDK5RAP3-211ENST00000578996 KRTAP12-1P59990 96 aa3.38□□□□□ -1.87
CDK5RAP3-211ENST00000578996 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
CDK5RAP3-211ENST00000578996 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
CDK5RAP3-211ENST00000578996 MT1GP13640 62 aa3.32□□□□□ -1.88
CDK5RAP3-211ENST00000578996 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
CDK5RAP3-211ENST00000578996 ROMO1P60602 79 aa3.29□□□□□ -1.88
CDK5RAP3-211ENST00000578996 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
CDK5RAP3-211ENST00000578996 MT4P47944 62 aa3.28□□□□□ -1.88
CDK5RAP3-211ENST00000578996 MT1MQ8N339 61 aa3.28□□□□□ -1.88
CDK5RAP3-211ENST00000578996 MT1LQ93083 61 aa3.26□□□□□ -1.89
CDK5RAP3-211ENST00000578996 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
CDK5RAP3-211ENST00000578996 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
CDK5RAP3-211ENST00000578996 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
CDK5RAP3-211ENST00000578996 TNP1P09430 55 aa3.24□□□□□ -1.89
CDK5RAP3-211ENST00000578996 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
CDK5RAP3-211ENST00000578996 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
CDK5RAP3-211ENST00000578996 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
CDK5RAP3-211ENST00000578996 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
CDK5RAP3-211ENST00000578996 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
CDK5RAP3-211ENST00000578996 KRTAP23-1A1A580 65 aa3.12□□□□□ -1.91
CDK5RAP3-211ENST00000578996 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
CDK5RAP3-211ENST00000578996 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
CDK5RAP3-211ENST00000578996 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
CDK5RAP3-211ENST00000578996 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
CDK5RAP3-211ENST00000578996 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
CDK5RAP3-211ENST00000578996 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
CDK5RAP3-211ENST00000578996 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
CDK5RAP3-211ENST00000578996 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
CDK5RAP3-211ENST00000578996 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
CDK5RAP3-211ENST00000578996 KRTAP15-1Q3LI76 137 aa2.87□□□□□ -1.95
CDK5RAP3-211ENST00000578996 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
CDK5RAP3-211ENST00000578996 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
CDK5RAP3-211ENST00000578996 MT1AP04731 61 aa2.77□□□□□ -1.97
CDK5RAP3-211ENST00000578996 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
CDK5RAP3-211ENST00000578996 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
CDK5RAP3-211ENST00000578996 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
CDK5RAP3-211ENST00000578996 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
CDK5RAP3-211ENST00000578996 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CDK5RAP3-211ENST00000578996 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
CDK5RAP3-211ENST00000578996 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
CDK5RAP3-211ENST00000578996 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CDK5RAP3-211ENST00000578996 NDUFAF8A1L188 74 aa2.57□□□□□ -2
CDK5RAP3-211ENST00000578996 MUC5ACP98088 5654 aa2.57□□□□□ -2
CDK5RAP3-211ENST00000578996 MT3P25713 68 aa2.55□□□□□ -2
CDK5RAP3-211ENST00000578996 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
CDK5RAP3-211ENST00000578996 H3BS24 57 aa2.51□□□□□ -2.01
CDK5RAP3-211ENST00000578996 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
CDK5RAP3-211ENST00000578996 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
CDK5RAP3-211ENST00000578996 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
CDK5RAP3-211ENST00000578996 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
CDK5RAP3-211ENST00000578996 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
CDK5RAP3-211ENST00000578996 INE1O15225 51 aa2.24□□□□□ -2.05
CDK5RAP3-211ENST00000578996 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
CDK5RAP3-211ENST00000578996 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
CDK5RAP3-211ENST00000578996 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
CDK5RAP3-211ENST00000578996 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
CDK5RAP3-211ENST00000578996 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
CDK5RAP3-211ENST00000578996 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
CDK5RAP3-211ENST00000578996 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CDK5RAP3-211ENST00000578996 PRM1P04553 51 aa1.68□□□□□ -2.14
CDK5RAP3-211ENST00000578996 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
CDK5RAP3-211ENST00000578996 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
CDK5RAP3-211ENST00000578996 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 127.8 ms