RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 PRR15LQ9BU68 103 aa7.02□□□□□ -1.29
LIMD2-206ENST00000578993 LINC01558Q9Y6Z2 57 aa7.02□□□□□ -1.29
LIMD2-206ENST00000578993 ATP5EP56381 51 aaPredicted RBP7.01□□□□□ -1.29
LIMD2-206ENST00000578993 KRTAP5-4Q6L8H1 288 aa6.97□□□□□ -1.29
LIMD2-206ENST00000578993 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
LIMD2-206ENST00000578993 KRTAP12-3P60328 96 aa6.89□□□□□ -1.31
LIMD2-206ENST00000578993 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
LIMD2-206ENST00000578993 UQCR11O14957 56 aa6.82□□□□□ -1.32
LIMD2-206ENST00000578993 AHNAK2Q8IVF2 5795 aa6.81□□□□□ -1.32
LIMD2-206ENST00000578993 TMEM258P61165 79 aa6.81□□□□□ -1.32
LIMD2-206ENST00000578993 KRTAP5-10Q6L8G5 202 aa6.69□□□□□ -1.34
LIMD2-206ENST00000578993 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
LIMD2-206ENST00000578993 KRTAP5-5Q701N2 237 aaPredicted RBP6.67□□□□□ -1.34
LIMD2-206ENST00000578993 KRTAP25-1Q3LHN0 102 aa6.66□□□□□ -1.34
LIMD2-206ENST00000578993 KRTAP20-2Q3LI61 65 aa6.57□□□□□ -1.36
LIMD2-206ENST00000578993 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
LIMD2-206ENST00000578993 PSPHP1O15172 72 aa6.5□□□□□ -1.37
LIMD2-206ENST00000578993 KRTAP5-3Q6L8H2 238 aa6.5□□□□□ -1.37
LIMD2-206ENST00000578993 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
LIMD2-206ENST00000578993 K7ERS5 55 aa6.48□□□□□ -1.37
LIMD2-206ENST00000578993 Q1T7F1 81 aa6.45□□□□□ -1.38
LIMD2-206ENST00000578993 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
LIMD2-206ENST00000578993 KRTAP12-4P60329 112 aa6.42□□□□□ -1.38
LIMD2-206ENST00000578993 KRTAP5-7Q6L8G8 165 aa6.42□□□□□ -1.38
LIMD2-206ENST00000578993 V9GYY9 64 aa6.42□□□□□ -1.38
LIMD2-206ENST00000578993 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
LIMD2-206ENST00000578993 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.38
LIMD2-206ENST00000578993 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
LIMD2-206ENST00000578993 LCE3CQ5T5A8 94 aa6.35□□□□□ -1.39
LIMD2-206ENST00000578993 A6NED7 52 aa6.23□□□□□ -1.41
LIMD2-206ENST00000578993 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
LIMD2-206ENST00000578993 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.42
LIMD2-206ENST00000578993 MT1AP04731 61 aa6.14□□□□□ -1.43
LIMD2-206ENST00000578993 ROMO1P60602 79 aa6.1□□□□□ -1.43
LIMD2-206ENST00000578993 KRTAP5-2Q701N4 177 aa6.09□□□□□ -1.43
LIMD2-206ENST00000578993 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
LIMD2-206ENST00000578993 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
LIMD2-206ENST00000578993 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
LIMD2-206ENST00000578993 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
LIMD2-206ENST00000578993 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
LIMD2-206ENST00000578993 KRTAP5-8O75690 187 aa5.84□□□□□ -1.47
LIMD2-206ENST00000578993 PCP4P48539 62 aa5.71□□□□□ -1.5
LIMD2-206ENST00000578993 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
LIMD2-206ENST00000578993 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
LIMD2-206ENST00000578993 MUC5ACP98088 5654 aa5.59□□□□□ -1.51
LIMD2-206ENST00000578993 MT3P25713 68 aa5.58□□□□□ -1.52
LIMD2-206ENST00000578993 AHNAKQ09666 5890 aaKnown RBP5.58□□□□□ -1.52
LIMD2-206ENST00000578993 KRTAP5-1Q6L8H4 278 aa5.49□□□□□ -1.53
LIMD2-206ENST00000578993 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
LIMD2-206ENST00000578993 BRK1Q8WUW1 75 aa5.17□□□□□ -1.58
LIMD2-206ENST00000578993 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
LIMD2-206ENST00000578993 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
LIMD2-206ENST00000578993 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
LIMD2-206ENST00000578993 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
LIMD2-206ENST00000578993 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
LIMD2-206ENST00000578993 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
LIMD2-206ENST00000578993 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
LIMD2-206ENST00000578993 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
LIMD2-206ENST00000578993 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
LIMD2-206ENST00000578993 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
LIMD2-206ENST00000578993 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
LIMD2-206ENST00000578993 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
LIMD2-206ENST00000578993 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
LIMD2-206ENST00000578993 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
LIMD2-206ENST00000578993 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
LIMD2-206ENST00000578993 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
LIMD2-206ENST00000578993 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
LIMD2-206ENST00000578993 PHGR1C9JFL3 82 aa3.86□□□□□ -1.79
LIMD2-206ENST00000578993 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
LIMD2-206ENST00000578993 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
LIMD2-206ENST00000578993 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
LIMD2-206ENST00000578993 H3BS24 57 aa3.14□□□□□ -1.91
LIMD2-206ENST00000578993 PRM1P04553 51 aa3.14□□□□□ -1.91
LIMD2-206ENST00000578993 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
LIMD2-206ENST00000578993 A0A0A0MQY5 61 aa2.88□□□□□ -1.95
LIMD2-206ENST00000578993 INE1O15225 51 aa2.67□□□□□ -1.98
LIMD2-206ENST00000578993 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 1280.3 ms