RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 LINC01558Q9Y6Z2 57 aa2.52□□□□□ -2.01
TRAF4-213ENST00000578917 UQCR11O14957 56 aa2.5□□□□□ -2.01
TRAF4-213ENST00000578917 TNP1P09430 55 aa2.47□□□□□ -2.01
TRAF4-213ENST00000578917 V9GYY9 64 aa2.46□□□□□ -2.02
TRAF4-213ENST00000578917 A0A0A0MQY5 61 aa2.45□□□□□ -2.02
TRAF4-213ENST00000578917 K7ERS5 55 aa2.45□□□□□ -2.02
TRAF4-213ENST00000578917 MIR22HGQ0VDD5 57 aa2.45□□□□□ -2.02
TRAF4-213ENST00000578917 PSPHP1O15172 72 aa2.44□□□□□ -2.02
TRAF4-213ENST00000578917 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
TRAF4-213ENST00000578917 C10orf95Q9H7T3 257 aa2.43□□□□□ -2.02
TRAF4-213ENST00000578917 KRTAP19-5Q3LI72 72 aa2.42□□□□□ -2.02
TRAF4-213ENST00000578917 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
TRAF4-213ENST00000578917 MT1EP04732 61 aa2.41□□□□□ -2.02
TRAF4-213ENST00000578917 Q1T7F1 81 aa2.4□□□□□ -2.03
TRAF4-213ENST00000578917 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.03
TRAF4-213ENST00000578917 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
TRAF4-213ENST00000578917 KRTAP23-1A1A580 65 aa2.38□□□□□ -2.03
TRAF4-213ENST00000578917 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
TRAF4-213ENST00000578917 A6NED7 52 aa2.37□□□□□ -2.03
TRAF4-213ENST00000578917 MT1GP13640 62 aa2.36□□□□□ -2.03
TRAF4-213ENST00000578917 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
TRAF4-213ENST00000578917 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
TRAF4-213ENST00000578917 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
TRAF4-213ENST00000578917 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
TRAF4-213ENST00000578917 RPS28P62857 69 aaKnown RBP2.32□□□□□ -2.04
TRAF4-213ENST00000578917 MT1LQ93083 61 aa2.32□□□□□ -2.04
TRAF4-213ENST00000578917 MT1MQ8N339 61 aa2.3□□□□□ -2.04
TRAF4-213ENST00000578917 CDC42SE1Q9NRR8 79 aa2.29□□□□□ -2.04
TRAF4-213ENST00000578917 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
TRAF4-213ENST00000578917 ROMO1P60602 79 aa2.24□□□□□ -2.05
TRAF4-213ENST00000578917 MT4P47944 62 aa2.21□□□□□ -2.06
TRAF4-213ENST00000578917 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
TRAF4-213ENST00000578917 KRTAP15-1Q3LI76 137 aa2.18□□□□□ -2.06
TRAF4-213ENST00000578917 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
TRAF4-213ENST00000578917 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
TRAF4-213ENST00000578917 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
TRAF4-213ENST00000578917 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
TRAF4-213ENST00000578917 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
TRAF4-213ENST00000578917 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
TRAF4-213ENST00000578917 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
TRAF4-213ENST00000578917 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
TRAF4-213ENST00000578917 PRAC1Q96KF2 57 aa2.05□□□□□ -2.08
TRAF4-213ENST00000578917 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
TRAF4-213ENST00000578917 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
TRAF4-213ENST00000578917 PMAIP1Q13794 54 aa1.99□□□□□ -2.09
TRAF4-213ENST00000578917 PRO0628Q9UI54 55 aa1.99□□□□□ -2.09
TRAF4-213ENST00000578917 MT1AP04731 61 aa1.98□□□□□ -2.09
TRAF4-213ENST00000578917 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
TRAF4-213ENST00000578917 KRTAP9-6A8MVA2 160 aa1.96□□□□□ -2.1
TRAF4-213ENST00000578917 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
TRAF4-213ENST00000578917 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
TRAF4-213ENST00000578917 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
TRAF4-213ENST00000578917 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
TRAF4-213ENST00000578917 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
TRAF4-213ENST00000578917 KTN1-AS1Q86SY8 53 aa1.86□□□□□ -2.11
TRAF4-213ENST00000578917 MT3P25713 68 aa1.84□□□□□ -2.11
TRAF4-213ENST00000578917 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
TRAF4-213ENST00000578917 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
TRAF4-213ENST00000578917 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
TRAF4-213ENST00000578917 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
TRAF4-213ENST00000578917 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
TRAF4-213ENST00000578917 LUZP6Q538Z0 58 aa1.72□□□□□ -2.13
TRAF4-213ENST00000578917 LCE1EQ5T753 118 aa1.7□□□□□ -2.14
TRAF4-213ENST00000578917 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
TRAF4-213ENST00000578917 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
TRAF4-213ENST00000578917 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
TRAF4-213ENST00000578917 LCE3DQ9BYE3 92 aa1.57□□□□□ -2.16
TRAF4-213ENST00000578917 LCE1CQ5T751 118 aa1.53□□□□□ -2.16
TRAF4-213ENST00000578917 LCE3EQ5T5B0 92 aa1.48□□□□□ -2.17
TRAF4-213ENST00000578917 KRTAP4-4Q9BYR3 166 aa1.43□□□□□ -2.18
TRAF4-213ENST00000578917 LCE1FQ5T754 118 aa1.4□□□□□ -2.19
TRAF4-213ENST00000578917 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
TRAF4-213ENST00000578917 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
TRAF4-213ENST00000578917 INE1O15225 51 aa1.24□□□□□ -2.21
TRAF4-213ENST00000578917 PRM1P04553 51 aa1.14□□□□□ -2.23
TRAF4-213ENST00000578917 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
TRAF4-213ENST00000578917 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
TRAF4-213ENST00000578917 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms