RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SPRR2DP22532 72 aa4.65□□□□□ -1.67
SMARCE1-214ENST00000578112 KRTAP3-2Q9BYR7 98 aa4.55□□□□□ -1.68
SMARCE1-214ENST00000578112 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
SMARCE1-214ENST00000578112 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
SMARCE1-214ENST00000578112 M0QZ58 72 aa4.52□□□□□ -1.69
SMARCE1-214ENST00000578112 INE1O15225 51 aa4.5□□□□□ -1.69
SMARCE1-214ENST00000578112 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
SMARCE1-214ENST00000578112 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
SMARCE1-214ENST00000578112 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
SMARCE1-214ENST00000578112 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
SMARCE1-214ENST00000578112 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
SMARCE1-214ENST00000578112 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
SMARCE1-214ENST00000578112 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
SMARCE1-214ENST00000578112 MT1EP04732 61 aa4.21□□□□□ -1.73
SMARCE1-214ENST00000578112 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
SMARCE1-214ENST00000578112 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
SMARCE1-214ENST00000578112 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
SMARCE1-214ENST00000578112 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
SMARCE1-214ENST00000578112 MT1GP13640 62 aa4.16□□□□□ -1.74
SMARCE1-214ENST00000578112 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
SMARCE1-214ENST00000578112 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
SMARCE1-214ENST00000578112 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
SMARCE1-214ENST00000578112 A0A0D9SG42 100 aa4.04□□□□□ -1.76
SMARCE1-214ENST00000578112 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
SMARCE1-214ENST00000578112 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
SMARCE1-214ENST00000578112 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
SMARCE1-214ENST00000578112 MT1MQ8N339 61 aa4.02□□□□□ -1.77
SMARCE1-214ENST00000578112 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
SMARCE1-214ENST00000578112 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
SMARCE1-214ENST00000578112 MT4P47944 62 aa3.99□□□□□ -1.77
SMARCE1-214ENST00000578112 MT1LQ93083 61 aa3.98□□□□□ -1.77
SMARCE1-214ENST00000578112 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
SMARCE1-214ENST00000578112 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
SMARCE1-214ENST00000578112 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
SMARCE1-214ENST00000578112 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
SMARCE1-214ENST00000578112 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
SMARCE1-214ENST00000578112 TNP1P09430 55 aa3.84□□□□□ -1.79
SMARCE1-214ENST00000578112 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
SMARCE1-214ENST00000578112 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
SMARCE1-214ENST00000578112 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
SMARCE1-214ENST00000578112 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
SMARCE1-214ENST00000578112 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
SMARCE1-214ENST00000578112 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
SMARCE1-214ENST00000578112 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
SMARCE1-214ENST00000578112 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
SMARCE1-214ENST00000578112 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
SMARCE1-214ENST00000578112 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
SMARCE1-214ENST00000578112 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
SMARCE1-214ENST00000578112 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
SMARCE1-214ENST00000578112 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
SMARCE1-214ENST00000578112 MT1AP04731 61 aa3.44□□□□□ -1.86
SMARCE1-214ENST00000578112 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
SMARCE1-214ENST00000578112 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
SMARCE1-214ENST00000578112 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
SMARCE1-214ENST00000578112 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-214ENST00000578112 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
SMARCE1-214ENST00000578112 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
SMARCE1-214ENST00000578112 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
SMARCE1-214ENST00000578112 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
SMARCE1-214ENST00000578112 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
SMARCE1-214ENST00000578112 MT3P25713 68 aa3.16□□□□□ -1.9
SMARCE1-214ENST00000578112 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
SMARCE1-214ENST00000578112 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
SMARCE1-214ENST00000578112 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
SMARCE1-214ENST00000578112 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.94
SMARCE1-214ENST00000578112 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
SMARCE1-214ENST00000578112 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SMARCE1-214ENST00000578112 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
SMARCE1-214ENST00000578112 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
SMARCE1-214ENST00000578112 PRM1P04553 51 aa2.59□□□□□ -2
SMARCE1-214ENST00000578112 LCE3DQ9BYE3 92 aa2.59□□□□□ -2
SMARCE1-214ENST00000578112 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
SMARCE1-214ENST00000578112 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
SMARCE1-214ENST00000578112 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
SMARCE1-214ENST00000578112 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
SMARCE1-214ENST00000578112 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
SMARCE1-214ENST00000578112 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
SMARCE1-214ENST00000578112 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms