RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
CDK5RAP3-204ENST00000577664 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
CDK5RAP3-204ENST00000577664 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
CDK5RAP3-204ENST00000577664 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
CDK5RAP3-204ENST00000577664 ROMO1P60602 79 aa4.3□□□□□ -1.72
CDK5RAP3-204ENST00000577664 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
CDK5RAP3-204ENST00000577664 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
CDK5RAP3-204ENST00000577664 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
CDK5RAP3-204ENST00000577664 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
CDK5RAP3-204ENST00000577664 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
CDK5RAP3-204ENST00000577664 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
CDK5RAP3-204ENST00000577664 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
CDK5RAP3-204ENST00000577664 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
CDK5RAP3-204ENST00000577664 SVIPQ8NHG7 77 aa4.15□□□□□ -1.75
CDK5RAP3-204ENST00000577664 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
CDK5RAP3-204ENST00000577664 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
CDK5RAP3-204ENST00000577664 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
CDK5RAP3-204ENST00000577664 MT1EP04732 61 aa4.09□□□□□ -1.75
CDK5RAP3-204ENST00000577664 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
CDK5RAP3-204ENST00000577664 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
CDK5RAP3-204ENST00000577664 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
CDK5RAP3-204ENST00000577664 MT4P47944 62 aa4.04□□□□□ -1.76
CDK5RAP3-204ENST00000577664 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
CDK5RAP3-204ENST00000577664 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
CDK5RAP3-204ENST00000577664 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
CDK5RAP3-204ENST00000577664 MT1LQ93083 61 aa3.97□□□□□ -1.77
CDK5RAP3-204ENST00000577664 MT1GP13640 62 aa3.96□□□□□ -1.78
CDK5RAP3-204ENST00000577664 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
CDK5RAP3-204ENST00000577664 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
CDK5RAP3-204ENST00000577664 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
CDK5RAP3-204ENST00000577664 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
CDK5RAP3-204ENST00000577664 MT1MQ8N339 61 aa3.86□□□□□ -1.79
CDK5RAP3-204ENST00000577664 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
CDK5RAP3-204ENST00000577664 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
CDK5RAP3-204ENST00000577664 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
CDK5RAP3-204ENST00000577664 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
CDK5RAP3-204ENST00000577664 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
CDK5RAP3-204ENST00000577664 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
CDK5RAP3-204ENST00000577664 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
CDK5RAP3-204ENST00000577664 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
CDK5RAP3-204ENST00000577664 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
CDK5RAP3-204ENST00000577664 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
CDK5RAP3-204ENST00000577664 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
CDK5RAP3-204ENST00000577664 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
CDK5RAP3-204ENST00000577664 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
CDK5RAP3-204ENST00000577664 KRTAP12-4P60329 112 aa3.4□□□□□ -1.87
CDK5RAP3-204ENST00000577664 MT1AP04731 61 aa3.39□□□□□ -1.87
CDK5RAP3-204ENST00000577664 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
CDK5RAP3-204ENST00000577664 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
CDK5RAP3-204ENST00000577664 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
CDK5RAP3-204ENST00000577664 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
CDK5RAP3-204ENST00000577664 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
CDK5RAP3-204ENST00000577664 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
CDK5RAP3-204ENST00000577664 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
CDK5RAP3-204ENST00000577664 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
CDK5RAP3-204ENST00000577664 MT3P25713 68 aa3.09□□□□□ -1.91
CDK5RAP3-204ENST00000577664 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
CDK5RAP3-204ENST00000577664 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
CDK5RAP3-204ENST00000577664 H3BS24 57 aa2.85□□□□□ -1.95
CDK5RAP3-204ENST00000577664 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
CDK5RAP3-204ENST00000577664 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
CDK5RAP3-204ENST00000577664 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
CDK5RAP3-204ENST00000577664 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
CDK5RAP3-204ENST00000577664 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
CDK5RAP3-204ENST00000577664 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
CDK5RAP3-204ENST00000577664 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
CDK5RAP3-204ENST00000577664 PHGR1C9JFL3 82 aa2.54□□□□□ -2
CDK5RAP3-204ENST00000577664 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
CDK5RAP3-204ENST00000577664 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
CDK5RAP3-204ENST00000577664 INE1O15225 51 aa2.51□□□□□ -2.01
CDK5RAP3-204ENST00000577664 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
CDK5RAP3-204ENST00000577664 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
CDK5RAP3-204ENST00000577664 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
CDK5RAP3-204ENST00000577664 PRM1P04553 51 aa2.19□□□□□ -2.06
CDK5RAP3-204ENST00000577664 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
CDK5RAP3-204ENST00000577664 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
CDK5RAP3-204ENST00000577664 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
CDK5RAP3-204ENST00000577664 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 85.4 ms