RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
LITAF-218ENST00000576036 ROMO1P60602 79 aa5.63□□□□□ -1.51
LITAF-218ENST00000576036 MT1LQ93083 61 aa5.62□□□□□ -1.51
LITAF-218ENST00000576036 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
LITAF-218ENST00000576036 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
LITAF-218ENST00000576036 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
LITAF-218ENST00000576036 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
LITAF-218ENST00000576036 MT1GP13640 62 aa5.55□□□□□ -1.52
LITAF-218ENST00000576036 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
LITAF-218ENST00000576036 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
LITAF-218ENST00000576036 MT1MQ8N339 61 aa5.51□□□□□ -1.53
LITAF-218ENST00000576036 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
LITAF-218ENST00000576036 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
LITAF-218ENST00000576036 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
LITAF-218ENST00000576036 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
LITAF-218ENST00000576036 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
LITAF-218ENST00000576036 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
LITAF-218ENST00000576036 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
LITAF-218ENST00000576036 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
LITAF-218ENST00000576036 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
LITAF-218ENST00000576036 PMAIP1Q13794 54 aa5.21□□□□□ -1.58
LITAF-218ENST00000576036 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
LITAF-218ENST00000576036 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
LITAF-218ENST00000576036 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
LITAF-218ENST00000576036 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
LITAF-218ENST00000576036 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
LITAF-218ENST00000576036 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
LITAF-218ENST00000576036 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
LITAF-218ENST00000576036 KRTAP4-12Q9BQ66 201 aa5.02□□□□□ -1.61
LITAF-218ENST00000576036 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
LITAF-218ENST00000576036 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
LITAF-218ENST00000576036 MT4P47944 62 aa4.94□□□□□ -1.62
LITAF-218ENST00000576036 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
LITAF-218ENST00000576036 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
LITAF-218ENST00000576036 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
LITAF-218ENST00000576036 MT1AP04731 61 aa4.77□□□□□ -1.65
LITAF-218ENST00000576036 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
LITAF-218ENST00000576036 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
LITAF-218ENST00000576036 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
LITAF-218ENST00000576036 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
LITAF-218ENST00000576036 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
LITAF-218ENST00000576036 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.65
LITAF-218ENST00000576036 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
LITAF-218ENST00000576036 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
LITAF-218ENST00000576036 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
LITAF-218ENST00000576036 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
LITAF-218ENST00000576036 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
LITAF-218ENST00000576036 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
LITAF-218ENST00000576036 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
LITAF-218ENST00000576036 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
LITAF-218ENST00000576036 MT3P25713 68 aa4.3□□□□□ -1.72
LITAF-218ENST00000576036 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
LITAF-218ENST00000576036 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
LITAF-218ENST00000576036 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
LITAF-218ENST00000576036 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
LITAF-218ENST00000576036 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
LITAF-218ENST00000576036 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
LITAF-218ENST00000576036 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
LITAF-218ENST00000576036 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
LITAF-218ENST00000576036 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
LITAF-218ENST00000576036 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
LITAF-218ENST00000576036 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
LITAF-218ENST00000576036 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
LITAF-218ENST00000576036 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
LITAF-218ENST00000576036 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
LITAF-218ENST00000576036 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
LITAF-218ENST00000576036 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
LITAF-218ENST00000576036 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
LITAF-218ENST00000576036 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
LITAF-218ENST00000576036 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
LITAF-218ENST00000576036 INE1O15225 51 aa2.96□□□□□ -1.94
LITAF-218ENST00000576036 PRM1P04553 51 aa2.93□□□□□ -1.94
LITAF-218ENST00000576036 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
LITAF-218ENST00000576036 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
LITAF-218ENST00000576036 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
LITAF-218ENST00000576036 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
LITAF-218ENST00000576036 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms