RNA–Protein interactions for RNA: ENST00000575836.1

TNFRSF12A-207, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3

Gene TNFRSF12A, Length 161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-207ENST00000575836 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
TNFRSF12A-207ENST00000575836 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
TNFRSF12A-207ENST00000575836 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
TNFRSF12A-207ENST00000575836 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
TNFRSF12A-207ENST00000575836 MT1GP13640 62 aa5.54□□□□□ -1.52
TNFRSF12A-207ENST00000575836 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
TNFRSF12A-207ENST00000575836 MT1LQ93083 61 aa5.5□□□□□ -1.53
TNFRSF12A-207ENST00000575836 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
TNFRSF12A-207ENST00000575836 ROMO1P60602 79 aa5.44□□□□□ -1.54
TNFRSF12A-207ENST00000575836 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
TNFRSF12A-207ENST00000575836 MT1MQ8N339 61 aa5.42□□□□□ -1.54
TNFRSF12A-207ENST00000575836 DSTQ03001 7570 aaKnown RBP5.33□□□□□ -1.56
TNFRSF12A-207ENST00000575836 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
TNFRSF12A-207ENST00000575836 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
TNFRSF12A-207ENST00000575836 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
TNFRSF12A-207ENST00000575836 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
TNFRSF12A-207ENST00000575836 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
TNFRSF12A-207ENST00000575836 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
TNFRSF12A-207ENST00000575836 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
TNFRSF12A-207ENST00000575836 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
TNFRSF12A-207ENST00000575836 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
TNFRSF12A-207ENST00000575836 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
TNFRSF12A-207ENST00000575836 MT4P47944 62 aa4.99□□□□□ -1.61
TNFRSF12A-207ENST00000575836 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
TNFRSF12A-207ENST00000575836 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
TNFRSF12A-207ENST00000575836 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
TNFRSF12A-207ENST00000575836 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
TNFRSF12A-207ENST00000575836 HMCN1Q96RW7 5635 aa4.84□□□□□ -1.64
TNFRSF12A-207ENST00000575836 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
TNFRSF12A-207ENST00000575836 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
TNFRSF12A-207ENST00000575836 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
TNFRSF12A-207ENST00000575836 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
TNFRSF12A-207ENST00000575836 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
TNFRSF12A-207ENST00000575836 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
TNFRSF12A-207ENST00000575836 MT1AP04731 61 aa4.7□□□□□ -1.66
TNFRSF12A-207ENST00000575836 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
TNFRSF12A-207ENST00000575836 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
TNFRSF12A-207ENST00000575836 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
TNFRSF12A-207ENST00000575836 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
TNFRSF12A-207ENST00000575836 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
TNFRSF12A-207ENST00000575836 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
TNFRSF12A-207ENST00000575836 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
TNFRSF12A-207ENST00000575836 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
TNFRSF12A-207ENST00000575836 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
TNFRSF12A-207ENST00000575836 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
TNFRSF12A-207ENST00000575836 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
TNFRSF12A-207ENST00000575836 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
TNFRSF12A-207ENST00000575836 MT3P25713 68 aa4.3□□□□□ -1.72
TNFRSF12A-207ENST00000575836 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
TNFRSF12A-207ENST00000575836 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
TNFRSF12A-207ENST00000575836 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
TNFRSF12A-207ENST00000575836 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
TNFRSF12A-207ENST00000575836 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
TNFRSF12A-207ENST00000575836 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
TNFRSF12A-207ENST00000575836 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
TNFRSF12A-207ENST00000575836 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
TNFRSF12A-207ENST00000575836 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
TNFRSF12A-207ENST00000575836 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
TNFRSF12A-207ENST00000575836 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
TNFRSF12A-207ENST00000575836 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
TNFRSF12A-207ENST00000575836 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
TNFRSF12A-207ENST00000575836 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
TNFRSF12A-207ENST00000575836 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
TNFRSF12A-207ENST00000575836 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
TNFRSF12A-207ENST00000575836 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
TNFRSF12A-207ENST00000575836 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
TNFRSF12A-207ENST00000575836 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
TNFRSF12A-207ENST00000575836 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
TNFRSF12A-207ENST00000575836 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
TNFRSF12A-207ENST00000575836 A0A0A0MQY5 61 aa2.81□□□□□ -1.96
TNFRSF12A-207ENST00000575836 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
TNFRSF12A-207ENST00000575836 PRM1P04553 51 aa2.78□□□□□ -1.96
TNFRSF12A-207ENST00000575836 INE1O15225 51 aa2.77□□□□□ -1.97
TNFRSF12A-207ENST00000575836 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
TNFRSF12A-207ENST00000575836 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
TNFRSF12A-207ENST00000575836 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
TNFRSF12A-207ENST00000575836 H3BS24 57 aa1.98□□□□□ -2.09
TNFRSF12A-207ENST00000575836 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms