RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 A6NED7 52 aa5.58□□□□□ -1.52
TRAPPC1-207ENST00000575639 MT1EP04732 61 aa5.55□□□□□ -1.52
TRAPPC1-207ENST00000575639 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
TRAPPC1-207ENST00000575639 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
TRAPPC1-207ENST00000575639 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
TRAPPC1-207ENST00000575639 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
TRAPPC1-207ENST00000575639 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
TRAPPC1-207ENST00000575639 H3BS24 57 aa5.45□□□□□ -1.54
TRAPPC1-207ENST00000575639 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
TRAPPC1-207ENST00000575639 MT1GP13640 62 aa5.39□□□□□ -1.55
TRAPPC1-207ENST00000575639 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
TRAPPC1-207ENST00000575639 MT1LQ93083 61 aa5.34□□□□□ -1.55
TRAPPC1-207ENST00000575639 CDC42SE1Q9NRR8 79 aa5.34□□□□□ -1.55
TRAPPC1-207ENST00000575639 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
TRAPPC1-207ENST00000575639 KRTAP5-10Q6L8G5 202 aa5.32□□□□□ -1.56
TRAPPC1-207ENST00000575639 HMCN1Q96RW7 5635 aa5.27□□□□□ -1.57
TRAPPC1-207ENST00000575639 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
TRAPPC1-207ENST00000575639 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
TRAPPC1-207ENST00000575639 AHNAK2Q8IVF2 5795 aa5.26□□□□□ -1.57
TRAPPC1-207ENST00000575639 ROMO1P60602 79 aa5.26□□□□□ -1.57
TRAPPC1-207ENST00000575639 MT1MQ8N339 61 aa5.26□□□□□ -1.57
TRAPPC1-207ENST00000575639 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
TRAPPC1-207ENST00000575639 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
TRAPPC1-207ENST00000575639 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
TRAPPC1-207ENST00000575639 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
TRAPPC1-207ENST00000575639 MT4P47944 62 aa5.09□□□□□ -1.59
TRAPPC1-207ENST00000575639 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
TRAPPC1-207ENST00000575639 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
TRAPPC1-207ENST00000575639 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
TRAPPC1-207ENST00000575639 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
TRAPPC1-207ENST00000575639 BRK1Q8WUW1 75 aa5.01□□□□□ -1.61
TRAPPC1-207ENST00000575639 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
TRAPPC1-207ENST00000575639 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
TRAPPC1-207ENST00000575639 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
TRAPPC1-207ENST00000575639 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
TRAPPC1-207ENST00000575639 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
TRAPPC1-207ENST00000575639 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
TRAPPC1-207ENST00000575639 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC1-207ENST00000575639 PMAIP1Q13794 54 aa4.75□□□□□ -1.65
TRAPPC1-207ENST00000575639 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
TRAPPC1-207ENST00000575639 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
TRAPPC1-207ENST00000575639 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
TRAPPC1-207ENST00000575639 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
TRAPPC1-207ENST00000575639 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
TRAPPC1-207ENST00000575639 MT1AP04731 61 aa4.55□□□□□ -1.68
TRAPPC1-207ENST00000575639 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
TRAPPC1-207ENST00000575639 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
TRAPPC1-207ENST00000575639 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
TRAPPC1-207ENST00000575639 PRAC1Q96KF2 57 aa4.46□□□□□ -1.7
TRAPPC1-207ENST00000575639 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
TRAPPC1-207ENST00000575639 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC1-207ENST00000575639 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
TRAPPC1-207ENST00000575639 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
TRAPPC1-207ENST00000575639 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
TRAPPC1-207ENST00000575639 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
TRAPPC1-207ENST00000575639 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
TRAPPC1-207ENST00000575639 MT3P25713 68 aa4.19□□□□□ -1.74
TRAPPC1-207ENST00000575639 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
TRAPPC1-207ENST00000575639 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
TRAPPC1-207ENST00000575639 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
TRAPPC1-207ENST00000575639 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
TRAPPC1-207ENST00000575639 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
TRAPPC1-207ENST00000575639 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
TRAPPC1-207ENST00000575639 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
TRAPPC1-207ENST00000575639 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
TRAPPC1-207ENST00000575639 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
TRAPPC1-207ENST00000575639 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
TRAPPC1-207ENST00000575639 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC1-207ENST00000575639 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
TRAPPC1-207ENST00000575639 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
TRAPPC1-207ENST00000575639 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
TRAPPC1-207ENST00000575639 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
TRAPPC1-207ENST00000575639 PRM1P04553 51 aa2.67□□□□□ -1.98
TRAPPC1-207ENST00000575639 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
TRAPPC1-207ENST00000575639 INE1O15225 51 aa2.65□□□□□ -1.99
TRAPPC1-207ENST00000575639 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
TRAPPC1-207ENST00000575639 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
TRAPPC1-207ENST00000575639 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 47.1 ms