RNA–Protein interactions for RNA: ENST00000573645.1

XPO6-222, Transcript of exportin 6, human

TSL 3

Gene XPO6, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XPO6-222	ENST00000573645	LCE3A	Q5TA76	89 aa		4.39	□□□□□ -1.71
XPO6-222	ENST00000573645	KRTAP19-4	Q3LI73	84 aa		4.36	□□□□□ -1.71
XPO6-222	ENST00000573645	MT1L	Q93083	61 aa		4.36	□□□□□ -1.71
XPO6-222	ENST00000573645		V9GYY9	64 aa		4.35	□□□□□ -1.71
XPO6-222	ENST00000573645	MT1M	Q8N339	61 aa		4.34	□□□□□ -1.71
XPO6-222	ENST00000573645	MIR22HG	Q0VDD5	57 aa		4.33	□□□□□ -1.72
XPO6-222	ENST00000573645	KRTAP9-9	Q9BYP9	154 aa		4.32	□□□□□ -1.72
XPO6-222	ENST00000573645	KRTAP9-4	Q9BYQ2	154 aa		4.32	□□□□□ -1.72
XPO6-222	ENST00000573645		K7ERS5	55 aa		4.29	□□□□□ -1.72
XPO6-222	ENST00000573645		Q1T7F1	81 aa		4.29	□□□□□ -1.72
XPO6-222	ENST00000573645	KRTAP25-1	Q3LHN0	102 aa		4.27	□□□□□ -1.73
XPO6-222	ENST00000573645	KRTAP12-3	P60328	96 aa		4.26	□□□□□ -1.73
XPO6-222	ENST00000573645	LCE4A	Q5TA78	99 aa		4.23	□□□□□ -1.73
XPO6-222	ENST00000573645	PSPHP1	O15172	72 aa		4.22	□□□□□ -1.73
XPO6-222	ENST00000573645	KRTAP4-9	Q9BYQ8	210 aa		4.22	□□□□□ -1.73
XPO6-222	ENST00000573645	KRTAP23-1	A1A580	65 aa		4.17	□□□□□ -1.74
XPO6-222	ENST00000573645	LCE1D	Q5T752	114 aa		4.17	□□□□□ -1.74
XPO6-222	ENST00000573645	KRTAP4-3	Q9BYR4	195 aa		4.17	□□□□□ -1.74
XPO6-222	ENST00000573645	KRTAP5-4	Q6L8H1	288 aa		4.16	□□□□□ -1.74
XPO6-222	ENST00000573645	GPR98	Q8WXG9	6306 aa		4.15	□□□□□ -1.74
XPO6-222	ENST00000573645	HMCN1	Q96RW7	5635 aa		4.13	□□□□□ -1.75
XPO6-222	ENST00000573645	RPS28	P62857	69 aa	Known RBP	4.12	□□□□□ -1.75
XPO6-222	ENST00000573645		A6NED7	52 aa		4.11	□□□□□ -1.75
XPO6-222	ENST00000573645	MT4	P47944	62 aa		4.09	□□□□□ -1.75
XPO6-222	ENST00000573645	PCP4	P48539	62 aa		4.09	□□□□□ -1.75
XPO6-222	ENST00000573645	KRTAP4-7	Q9BYR0	210 aa		4.09	□□□□□ -1.75
XPO6-222	ENST00000573645	CDC42SE1	Q9NRR8	79 aa		4.03	□□□□□ -1.76
XPO6-222	ENST00000573645	KRTAP15-1	Q3LI76	137 aa		4.01	□□□□□ -1.77
XPO6-222	ENST00000573645	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4	□□□□□ -1.77
XPO6-222	ENST00000573645	ROMO1	P60602	79 aa		3.97	□□□□□ -1.77
XPO6-222	ENST00000573645	AHNAK2	Q8IVF2	5795 aa		3.96	□□□□□ -1.78
XPO6-222	ENST00000573645	SPRR5	A0A1B0GTR4	108 aa		3.93	□□□□□ -1.78
XPO6-222	ENST00000573645	LCE3C	Q5T5A8	94 aa		3.93	□□□□□ -1.78
XPO6-222	ENST00000573645	KRTAP12-4	P60329	112 aa		3.91	□□□□□ -1.78
XPO6-222	ENST00000573645	KRTAP4-11	Q9BYQ6	195 aa		3.91	□□□□□ -1.78
XPO6-222	ENST00000573645	KRTAP20-2	Q3LI61	65 aa		3.89	□□□□□ -1.79
XPO6-222	ENST00000573645	KRTAP4-2	Q9BYR5	136 aa		3.89	□□□□□ -1.79
XPO6-222	ENST00000573645	KRTAP5-10	Q6L8G5	202 aa		3.87	□□□□□ -1.79
XPO6-222	ENST00000573645	SVIP	Q8NHG7	77 aa		3.86	□□□□□ -1.79
XPO6-222	ENST00000573645	SYNE1	Q8NF91	8797 aa	Known RBP	3.85	□□□□□ -1.79
XPO6-222	ENST00000573645	KRTAP5-3	Q6L8H2	238 aa		3.79	□□□□□ -1.8
XPO6-222	ENST00000573645	MT1A	P04731	61 aa		3.73	□□□□□ -1.81
XPO6-222	ENST00000573645	KRTAP5-7	Q6L8G8	165 aa		3.73	□□□□□ -1.81
XPO6-222	ENST00000573645	KRTAP6-1	Q3LI64	71 aa		3.67	□□□□□ -1.82
XPO6-222	ENST00000573645	KRTAP9-6	A8MVA2	160 aa		3.66	□□□□□ -1.82
XPO6-222	ENST00000573645	KRTAP5-2	Q701N4	177 aa		3.65	□□□□□ -1.83
XPO6-222	ENST00000573645	BRK1	Q8WUW1	75 aa		3.53	□□□□□ -1.84
XPO6-222	ENST00000573645	KRTAP6-2	Q3LI66	62 aa		3.5	□□□□□ -1.85
XPO6-222	ENST00000573645	OBSCN	Q5VST9	7968 aa		3.47	□□□□□ -1.85
XPO6-222	ENST00000573645	MT3	P25713	68 aa		3.43	□□□□□ -1.86
XPO6-222	ENST00000573645	KRTAP5-8	O75690	187 aa		3.42	□□□□□ -1.86
XPO6-222	ENST00000573645	PMAIP1	Q13794	54 aa		3.34	□□□□□ -1.87
XPO6-222	ENST00000573645	AHNAK	Q09666	5890 aa	Known RBP	3.27	□□□□□ -1.89
XPO6-222	ENST00000573645	MUC5AC	P98088	5654 aa		3.27	□□□□□ -1.89
XPO6-222	ENST00000573645	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.26	□□□□□ -1.89
XPO6-222	ENST00000573645	KRTAP5-1	Q6L8H4	278 aa		3.25	□□□□□ -1.89
XPO6-222	ENST00000573645	PRAC1	Q96KF2	57 aa		3.21	□□□□□ -1.9
XPO6-222	ENST00000573645		A0A0A0MQY5	61 aa		3.2	□□□□□ -1.9
XPO6-222	ENST00000573645	LCE1E	Q5T753	118 aa		3.18	□□□□□ -1.9
XPO6-222	ENST00000573645	PRO0628	Q9UI54	55 aa		3.17	□□□□□ -1.9
XPO6-222	ENST00000573645	KTN1-AS1	Q86SY8	53 aa		3	□□□□□ -1.93
XPO6-222	ENST00000573645	LCE1C	Q5T751	118 aa		2.94	□□□□□ -1.94
XPO6-222	ENST00000573645	LCE1B	Q5T7P3	118 aa		2.94	□□□□□ -1.94
XPO6-222	ENST00000573645	LCE3D	Q9BYE3	92 aa		2.85	□□□□□ -1.95
XPO6-222	ENST00000573645	LUZP6	Q538Z0	58 aa		2.75	□□□□□ -1.97
XPO6-222	ENST00000573645	LCE3E	Q5T5B0	92 aa		2.69	□□□□□ -1.98
XPO6-222	ENST00000573645	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.69	□□□□□ -1.98
XPO6-222	ENST00000573645	KRTAP5-11	Q6L8G4	156 aa		2.65	□□□□□ -1.99
XPO6-222	ENST00000573645	LCE1F	Q5T754	118 aa		2.6	□□□□□ -1.99
XPO6-222	ENST00000573645	NDUFAF8	A1L188	74 aa		2.51	□□□□□ -2.01
XPO6-222	ENST00000573645	KRTAP21-2	Q3LI59	83 aa		2.44	□□□□□ -2.02
XPO6-222	ENST00000573645	PHGR1	C9JFL3	82 aa		2.28	□□□□□ -2.04
XPO6-222	ENST00000573645	KRTAP4-4	Q9BYR3	166 aa		2.16	□□□□□ -2.06
XPO6-222	ENST00000573645	MUC19	Q7Z5P9	8384 aa		2.13	□□□□□ -2.07
XPO6-222	ENST00000573645	PRM1	P04553	51 aa		1.99	□□□□□ -2.09
XPO6-222	ENST00000573645	INE1	O15225	51 aa		1.79	□□□□□ -2.12
XPO6-222	ENST00000573645	KRTAP21-1	Q3LI58	79 aa		1.73	□□□□□ -2.13
XPO6-222	ENST00000573645	MUC16	Q8WXI7	14507 aa		1.51	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 105.1 ms