RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 ATP5EP56381 51 aaPredicted RBP4.85□□□□□ -1.63
RAB40B-204ENST00000571554 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
RAB40B-204ENST00000571554 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
RAB40B-204ENST00000571554 MT4P47944 62 aa4.81□□□□□ -1.64
RAB40B-204ENST00000571554 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
RAB40B-204ENST00000571554 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
RAB40B-204ENST00000571554 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
RAB40B-204ENST00000571554 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
RAB40B-204ENST00000571554 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
RAB40B-204ENST00000571554 PRO0628Q9UI54 55 aa4.69□□□□□ -1.66
RAB40B-204ENST00000571554 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
RAB40B-204ENST00000571554 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
RAB40B-204ENST00000571554 UQCR11O14957 56 aa4.65□□□□□ -1.67
RAB40B-204ENST00000571554 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
RAB40B-204ENST00000571554 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
RAB40B-204ENST00000571554 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
RAB40B-204ENST00000571554 Q1T7F1 81 aa4.55□□□□□ -1.68
RAB40B-204ENST00000571554 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
RAB40B-204ENST00000571554 V9GYY9 64 aa4.55□□□□□ -1.68
RAB40B-204ENST00000571554 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
RAB40B-204ENST00000571554 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
RAB40B-204ENST00000571554 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
RAB40B-204ENST00000571554 PSPHP1O15172 72 aa4.47□□□□□ -1.69
RAB40B-204ENST00000571554 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
RAB40B-204ENST00000571554 K7ERS5 55 aa4.46□□□□□ -1.7
RAB40B-204ENST00000571554 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
RAB40B-204ENST00000571554 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
RAB40B-204ENST00000571554 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
RAB40B-204ENST00000571554 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
RAB40B-204ENST00000571554 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
RAB40B-204ENST00000571554 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
RAB40B-204ENST00000571554 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
RAB40B-204ENST00000571554 A6NED7 52 aa4.31□□□□□ -1.72
RAB40B-204ENST00000571554 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
RAB40B-204ENST00000571554 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
RAB40B-204ENST00000571554 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
RAB40B-204ENST00000571554 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
RAB40B-204ENST00000571554 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
RAB40B-204ENST00000571554 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
RAB40B-204ENST00000571554 ROMO1P60602 79 aa4.16□□□□□ -1.74
RAB40B-204ENST00000571554 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
RAB40B-204ENST00000571554 MT1AP04731 61 aa4.15□□□□□ -1.75
RAB40B-204ENST00000571554 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
RAB40B-204ENST00000571554 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
RAB40B-204ENST00000571554 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
RAB40B-204ENST00000571554 H3BS24 57 aa4.05□□□□□ -1.76
RAB40B-204ENST00000571554 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
RAB40B-204ENST00000571554 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
RAB40B-204ENST00000571554 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
RAB40B-204ENST00000571554 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
RAB40B-204ENST00000571554 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
RAB40B-204ENST00000571554 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
RAB40B-204ENST00000571554 MT3P25713 68 aa3.78□□□□□ -1.8
RAB40B-204ENST00000571554 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
RAB40B-204ENST00000571554 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
RAB40B-204ENST00000571554 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
RAB40B-204ENST00000571554 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
RAB40B-204ENST00000571554 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
RAB40B-204ENST00000571554 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
RAB40B-204ENST00000571554 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
RAB40B-204ENST00000571554 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
RAB40B-204ENST00000571554 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
RAB40B-204ENST00000571554 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
RAB40B-204ENST00000571554 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
RAB40B-204ENST00000571554 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
RAB40B-204ENST00000571554 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
RAB40B-204ENST00000571554 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
RAB40B-204ENST00000571554 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
RAB40B-204ENST00000571554 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
RAB40B-204ENST00000571554 INE1O15225 51 aa2.87□□□□□ -1.95
RAB40B-204ENST00000571554 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
RAB40B-204ENST00000571554 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
RAB40B-204ENST00000571554 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
RAB40B-204ENST00000571554 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
RAB40B-204ENST00000571554 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
RAB40B-204ENST00000571554 PRM1P04553 51 aa2.16□□□□□ -2.06
RAB40B-204ENST00000571554 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
RAB40B-204ENST00000571554 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 62.7 ms