RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 A0A1B0GU69 56 aa7.13□□□□□ -1.27
PKD1-240ENST00000570253 KRTAP5-3Q6L8H2 238 aa7.13□□□□□ -1.27
PKD1-240ENST00000570253 A8MU10 97 aa7.08□□□□□ -1.28
PKD1-240ENST00000570253 KRTAP20-2Q3LI61 65 aa7.02□□□□□ -1.29
PKD1-240ENST00000570253 KRTAP12-3P60328 96 aa7□□□□□ -1.29
PKD1-240ENST00000570253 KRTAP4-7Q9BYR0 210 aa7□□□□□ -1.29
PKD1-240ENST00000570253 SPRR5A0A1B0GTR4 108 aa6.97□□□□□ -1.29
PKD1-240ENST00000570253 COX7CP15954 63 aa6.96□□□□□ -1.3
PKD1-240ENST00000570253 KRTAP12-4P60329 112 aa6.95□□□□□ -1.3
PKD1-240ENST00000570253 H7BZZ5 65 aa6.92□□□□□ -1.3
PKD1-240ENST00000570253 KRTAP5-5Q701N2 237 aaPredicted RBP6.88□□□□□ -1.31
PKD1-240ENST00000570253 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
PKD1-240ENST00000570253 PCP4P48539 62 aa6.81□□□□□ -1.32
PKD1-240ENST00000570253 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
PKD1-240ENST00000570253 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
PKD1-240ENST00000570253 KRTAP19-4Q3LI73 84 aa6.66□□□□□ -1.34
PKD1-240ENST00000570253 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
PKD1-240ENST00000570253 UQCR11O14957 56 aa6.56□□□□□ -1.36
PKD1-240ENST00000570253 LINC01558Q9Y6Z2 57 aa6.56□□□□□ -1.36
PKD1-240ENST00000570253 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
PKD1-240ENST00000570253 KRTAP4-11Q9BYQ6 195 aa6.52□□□□□ -1.37
PKD1-240ENST00000570253 ANAPC13Q9BS18 74 aa6.51□□□□□ -1.37
PKD1-240ENST00000570253 K7ERS5 55 aa6.45□□□□□ -1.38
PKD1-240ENST00000570253 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
PKD1-240ENST00000570253 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
PKD1-240ENST00000570253 KRTAP5-2Q701N4 177 aa6.37□□□□□ -1.39
PKD1-240ENST00000570253 MT1AP04731 61 aa6.35□□□□□ -1.39
PKD1-240ENST00000570253 MIR22HGQ0VDD5 57 aa6.35□□□□□ -1.39
PKD1-240ENST00000570253 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
PKD1-240ENST00000570253 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
PKD1-240ENST00000570253 KRTAP6-1Q3LI64 71 aa6.3□□□□□ -1.4
PKD1-240ENST00000570253 KRTAP5-8O75690 187 aa6.27□□□□□ -1.41
PKD1-240ENST00000570253 AHNAKQ09666 5890 aaKnown RBP6.25□□□□□ -1.41
PKD1-240ENST00000570253 MUC5ACP98088 5654 aa6.24□□□□□ -1.41
PKD1-240ENST00000570253 MUC5BQ9HC84 5762 aaPredicted RBP6.23□□□□□ -1.41
PKD1-240ENST00000570253 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
PKD1-240ENST00000570253 TMEM258P61165 79 aa6.13□□□□□ -1.43
PKD1-240ENST00000570253 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
PKD1-240ENST00000570253 KRTAP6-2Q3LI66 62 aa6.12□□□□□ -1.43
PKD1-240ENST00000570253 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
PKD1-240ENST00000570253 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
PKD1-240ENST00000570253 V9GYY9 64 aa5.98□□□□□ -1.45
PKD1-240ENST00000570253 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
PKD1-240ENST00000570253 PSPHP1O15172 72 aa5.95□□□□□ -1.46
PKD1-240ENST00000570253 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
PKD1-240ENST00000570253 Q1T7F1 81 aa5.89□□□□□ -1.47
PKD1-240ENST00000570253 MT3P25713 68 aa5.87□□□□□ -1.47
PKD1-240ENST00000570253 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
PKD1-240ENST00000570253 ROMO1P60602 79 aa5.8□□□□□ -1.48
PKD1-240ENST00000570253 KRTAP5-1Q6L8H4 278 aa5.79□□□□□ -1.48
PKD1-240ENST00000570253 A6NED7 52 aa5.78□□□□□ -1.48
PKD1-240ENST00000570253 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
PKD1-240ENST00000570253 LCE1EQ5T753 118 aa5.46□□□□□ -1.54
PKD1-240ENST00000570253 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
PKD1-240ENST00000570253 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
PKD1-240ENST00000570253 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
PKD1-240ENST00000570253 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
PKD1-240ENST00000570253 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
PKD1-240ENST00000570253 LCE1CQ5T751 118 aa5.06□□□□□ -1.6
PKD1-240ENST00000570253 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
PKD1-240ENST00000570253 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
PKD1-240ENST00000570253 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
PKD1-240ENST00000570253 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
PKD1-240ENST00000570253 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
PKD1-240ENST00000570253 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
PKD1-240ENST00000570253 PHGR1C9JFL3 82 aa4.37□□□□□ -1.71
PKD1-240ENST00000570253 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
PKD1-240ENST00000570253 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
PKD1-240ENST00000570253 H3BS24 57 aa3.99□□□□□ -1.77
PKD1-240ENST00000570253 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
PKD1-240ENST00000570253 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
PKD1-240ENST00000570253 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
PKD1-240ENST00000570253 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
PKD1-240ENST00000570253 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
PKD1-240ENST00000570253 INE1O15225 51 aa3.43□□□□□ -1.86
PKD1-240ENST00000570253 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
PKD1-240ENST00000570253 PRM1P04553 51 aa2.91□□□□□ -1.94
PKD1-240ENST00000570253 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 83.3 ms