RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
HERPUD1-218ENST00000569569 A8MU10 97 aa5.3□□□□□ -1.56
HERPUD1-218ENST00000569569 SPRR2DP22532 72 aa5.25□□□□□ -1.57
HERPUD1-218ENST00000569569 UQCR11O14957 56 aa5.18□□□□□ -1.58
HERPUD1-218ENST00000569569 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
HERPUD1-218ENST00000569569 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
HERPUD1-218ENST00000569569 KRTAP2-1Q9BYU5 128 aa5.16□□□□□ -1.58
HERPUD1-218ENST00000569569 C10orf95Q9H7T3 257 aa5.14□□□□□ -1.59
HERPUD1-218ENST00000569569 MT1EP04732 61 aa5.13□□□□□ -1.59
HERPUD1-218ENST00000569569 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.13□□□□□ -1.59
HERPUD1-218ENST00000569569 TNP1P09430 55 aa5.11□□□□□ -1.59
HERPUD1-218ENST00000569569 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
HERPUD1-218ENST00000569569 V9GYY9 64 aa5.08□□□□□ -1.6
HERPUD1-218ENST00000569569 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
HERPUD1-218ENST00000569569 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
HERPUD1-218ENST00000569569 Q1T7F1 81 aa5.04□□□□□ -1.6
HERPUD1-218ENST00000569569 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
HERPUD1-218ENST00000569569 PSPHP1O15172 72 aa5.01□□□□□ -1.61
HERPUD1-218ENST00000569569 MT1GP13640 62 aa4.98□□□□□ -1.61
HERPUD1-218ENST00000569569 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-218ENST00000569569 K7ERS5 55 aa4.96□□□□□ -1.62
HERPUD1-218ENST00000569569 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
HERPUD1-218ENST00000569569 MT1LQ93083 61 aa4.92□□□□□ -1.62
HERPUD1-218ENST00000569569 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-218ENST00000569569 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
HERPUD1-218ENST00000569569 MT1MQ8N339 61 aa4.88□□□□□ -1.63
HERPUD1-218ENST00000569569 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
HERPUD1-218ENST00000569569 A6NED7 52 aa4.86□□□□□ -1.63
HERPUD1-218ENST00000569569 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
HERPUD1-218ENST00000569569 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
HERPUD1-218ENST00000569569 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
HERPUD1-218ENST00000569569 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
HERPUD1-218ENST00000569569 ROMO1P60602 79 aa4.63□□□□□ -1.67
HERPUD1-218ENST00000569569 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
HERPUD1-218ENST00000569569 MT4P47944 62 aa4.57□□□□□ -1.68
HERPUD1-218ENST00000569569 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
HERPUD1-218ENST00000569569 MT3P25713 68 aa4.49□□□□□ -1.69
HERPUD1-218ENST00000569569 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
HERPUD1-218ENST00000569569 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
HERPUD1-218ENST00000569569 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-218ENST00000569569 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
HERPUD1-218ENST00000569569 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
HERPUD1-218ENST00000569569 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
HERPUD1-218ENST00000569569 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
HERPUD1-218ENST00000569569 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
HERPUD1-218ENST00000569569 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
HERPUD1-218ENST00000569569 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
HERPUD1-218ENST00000569569 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
HERPUD1-218ENST00000569569 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
HERPUD1-218ENST00000569569 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
HERPUD1-218ENST00000569569 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
HERPUD1-218ENST00000569569 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
HERPUD1-218ENST00000569569 MT1AP04731 61 aa4.19□□□□□ -1.74
HERPUD1-218ENST00000569569 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
HERPUD1-218ENST00000569569 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
HERPUD1-218ENST00000569569 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
HERPUD1-218ENST00000569569 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
HERPUD1-218ENST00000569569 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
HERPUD1-218ENST00000569569 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
HERPUD1-218ENST00000569569 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
HERPUD1-218ENST00000569569 PRO0628Q9UI54 55 aa3.8□□□□□ -1.8
HERPUD1-218ENST00000569569 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
HERPUD1-218ENST00000569569 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
HERPUD1-218ENST00000569569 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
HERPUD1-218ENST00000569569 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
HERPUD1-218ENST00000569569 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-218ENST00000569569 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-218ENST00000569569 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
HERPUD1-218ENST00000569569 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
HERPUD1-218ENST00000569569 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
HERPUD1-218ENST00000569569 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
HERPUD1-218ENST00000569569 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
HERPUD1-218ENST00000569569 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
HERPUD1-218ENST00000569569 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
HERPUD1-218ENST00000569569 PRM1P04553 51 aa2.36□□□□□ -2.03
HERPUD1-218ENST00000569569 INE1O15225 51 aa2.26□□□□□ -2.05
HERPUD1-218ENST00000569569 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
HERPUD1-218ENST00000569569 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms