RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
COMMD4-225ENST00000569245 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
COMMD4-225ENST00000569245 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
COMMD4-225ENST00000569245 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.54
COMMD4-225ENST00000569245 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
COMMD4-225ENST00000569245 MT1EP04732 61 aa5.37□□□□□ -1.55
COMMD4-225ENST00000569245 PP632Q6XCG6 107 aa5.35□□□□□ -1.55
COMMD4-225ENST00000569245 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
COMMD4-225ENST00000569245 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
COMMD4-225ENST00000569245 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
COMMD4-225ENST00000569245 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
COMMD4-225ENST00000569245 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
COMMD4-225ENST00000569245 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
COMMD4-225ENST00000569245 MT1GP13640 62 aa5.2□□□□□ -1.58
COMMD4-225ENST00000569245 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
COMMD4-225ENST00000569245 MT1LQ93083 61 aa5.13□□□□□ -1.59
COMMD4-225ENST00000569245 MT1MQ8N339 61 aa5.11□□□□□ -1.59
COMMD4-225ENST00000569245 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
COMMD4-225ENST00000569245 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
COMMD4-225ENST00000569245 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
COMMD4-225ENST00000569245 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
COMMD4-225ENST00000569245 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
COMMD4-225ENST00000569245 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
COMMD4-225ENST00000569245 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
COMMD4-225ENST00000569245 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
COMMD4-225ENST00000569245 MT4P47944 62 aa4.91□□□□□ -1.62
COMMD4-225ENST00000569245 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
COMMD4-225ENST00000569245 HMCN1Q96RW7 5635 aa4.9□□□□□ -1.63
COMMD4-225ENST00000569245 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
COMMD4-225ENST00000569245 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
COMMD4-225ENST00000569245 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
COMMD4-225ENST00000569245 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
COMMD4-225ENST00000569245 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
COMMD4-225ENST00000569245 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
COMMD4-225ENST00000569245 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
COMMD4-225ENST00000569245 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
COMMD4-225ENST00000569245 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
COMMD4-225ENST00000569245 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
COMMD4-225ENST00000569245 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
COMMD4-225ENST00000569245 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
COMMD4-225ENST00000569245 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
COMMD4-225ENST00000569245 MT1AP04731 61 aa4.37□□□□□ -1.71
COMMD4-225ENST00000569245 KRTAP5-7Q6L8G8 165 aa4.37□□□□□ -1.71
COMMD4-225ENST00000569245 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
COMMD4-225ENST00000569245 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
COMMD4-225ENST00000569245 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
COMMD4-225ENST00000569245 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
COMMD4-225ENST00000569245 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
COMMD4-225ENST00000569245 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
COMMD4-225ENST00000569245 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
COMMD4-225ENST00000569245 MT3P25713 68 aa4.02□□□□□ -1.77
COMMD4-225ENST00000569245 KRTAP5-8O75690 187 aa4□□□□□ -1.77
COMMD4-225ENST00000569245 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
COMMD4-225ENST00000569245 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
COMMD4-225ENST00000569245 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
COMMD4-225ENST00000569245 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
COMMD4-225ENST00000569245 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
COMMD4-225ENST00000569245 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
COMMD4-225ENST00000569245 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
COMMD4-225ENST00000569245 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
COMMD4-225ENST00000569245 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
COMMD4-225ENST00000569245 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
COMMD4-225ENST00000569245 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
COMMD4-225ENST00000569245 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
COMMD4-225ENST00000569245 INE1O15225 51 aa3.4□□□□□ -1.87
COMMD4-225ENST00000569245 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
COMMD4-225ENST00000569245 H3BS24 57 aa3.16□□□□□ -1.9
COMMD4-225ENST00000569245 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
COMMD4-225ENST00000569245 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
COMMD4-225ENST00000569245 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
COMMD4-225ENST00000569245 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
COMMD4-225ENST00000569245 PRM1P04553 51 aa2.92□□□□□ -1.94
COMMD4-225ENST00000569245 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
COMMD4-225ENST00000569245 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
COMMD4-225ENST00000569245 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
COMMD4-225ENST00000569245 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
COMMD4-225ENST00000569245 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
COMMD4-225ENST00000569245 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms