RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 ROMO1P60602 79 aa5.98□□□□□ -1.45
SCAMP2-210ENST00000569124 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
SCAMP2-210ENST00000569124 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
SCAMP2-210ENST00000569124 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
SCAMP2-210ENST00000569124 PRO0628Q9UI54 55 aa5.84□□□□□ -1.47
SCAMP2-210ENST00000569124 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
SCAMP2-210ENST00000569124 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
SCAMP2-210ENST00000569124 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
SCAMP2-210ENST00000569124 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
SCAMP2-210ENST00000569124 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
SCAMP2-210ENST00000569124 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
SCAMP2-210ENST00000569124 MT1EP04732 61 aa5.7□□□□□ -1.5
SCAMP2-210ENST00000569124 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
SCAMP2-210ENST00000569124 KRTAP19-5Q3LI72 72 aa5.68□□□□□ -1.5
SCAMP2-210ENST00000569124 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
SCAMP2-210ENST00000569124 MT4P47944 62 aa5.59□□□□□ -1.51
SCAMP2-210ENST00000569124 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
SCAMP2-210ENST00000569124 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
SCAMP2-210ENST00000569124 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
SCAMP2-210ENST00000569124 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
SCAMP2-210ENST00000569124 AHNAK2Q8IVF2 5795 aa5.56□□□□□ -1.52
SCAMP2-210ENST00000569124 MT1GP13640 62 aa5.55□□□□□ -1.52
SCAMP2-210ENST00000569124 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
SCAMP2-210ENST00000569124 MT1MQ8N339 61 aa5.46□□□□□ -1.54
SCAMP2-210ENST00000569124 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
SCAMP2-210ENST00000569124 MT1LQ93083 61 aa5.45□□□□□ -1.54
SCAMP2-210ENST00000569124 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
SCAMP2-210ENST00000569124 KRTAP15-1Q3LI76 137 aa5.41□□□□□ -1.54
SCAMP2-210ENST00000569124 KRTAP5-4Q6L8H1 288 aa5.4□□□□□ -1.54
SCAMP2-210ENST00000569124 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
SCAMP2-210ENST00000569124 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
SCAMP2-210ENST00000569124 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
SCAMP2-210ENST00000569124 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
SCAMP2-210ENST00000569124 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
SCAMP2-210ENST00000569124 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
SCAMP2-210ENST00000569124 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
SCAMP2-210ENST00000569124 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
SCAMP2-210ENST00000569124 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
SCAMP2-210ENST00000569124 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
SCAMP2-210ENST00000569124 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
SCAMP2-210ENST00000569124 KRTAP4-12Q9BQ66 201 aa4.98□□□□□ -1.61
SCAMP2-210ENST00000569124 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
SCAMP2-210ENST00000569124 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
SCAMP2-210ENST00000569124 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
SCAMP2-210ENST00000569124 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
SCAMP2-210ENST00000569124 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
SCAMP2-210ENST00000569124 H3BS24 57 aa4.71□□□□□ -1.66
SCAMP2-210ENST00000569124 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
SCAMP2-210ENST00000569124 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
SCAMP2-210ENST00000569124 MT1AP04731 61 aa4.66□□□□□ -1.66
SCAMP2-210ENST00000569124 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
SCAMP2-210ENST00000569124 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
SCAMP2-210ENST00000569124 KRTAP5-8O75690 187 aa4.61□□□□□ -1.67
SCAMP2-210ENST00000569124 MUC5BQ9HC84 5762 aaPredicted RBP4.58□□□□□ -1.68
SCAMP2-210ENST00000569124 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
SCAMP2-210ENST00000569124 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
SCAMP2-210ENST00000569124 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
SCAMP2-210ENST00000569124 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
SCAMP2-210ENST00000569124 MT3P25713 68 aa4.26□□□□□ -1.73
SCAMP2-210ENST00000569124 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
SCAMP2-210ENST00000569124 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
SCAMP2-210ENST00000569124 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
SCAMP2-210ENST00000569124 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
SCAMP2-210ENST00000569124 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
SCAMP2-210ENST00000569124 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
SCAMP2-210ENST00000569124 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
SCAMP2-210ENST00000569124 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
SCAMP2-210ENST00000569124 INE1O15225 51 aa3.48□□□□□ -1.85
SCAMP2-210ENST00000569124 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
SCAMP2-210ENST00000569124 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SCAMP2-210ENST00000569124 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
SCAMP2-210ENST00000569124 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
SCAMP2-210ENST00000569124 PRM1P04553 51 aa3.08□□□□□ -1.92
SCAMP2-210ENST00000569124 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
SCAMP2-210ENST00000569124 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SCAMP2-210ENST00000569124 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
SCAMP2-210ENST00000569124 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
SCAMP2-210ENST00000569124 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 213.3 ms