RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
SCAMP2-209ENST00000567638 TMEM258P61165 79 aa5.23□□□□□ -1.57
SCAMP2-209ENST00000567638 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
SCAMP2-209ENST00000567638 ATP5EP56381 51 aaPredicted RBP5.2□□□□□ -1.58
SCAMP2-209ENST00000567638 HMCN1Q96RW7 5635 aa5.19□□□□□ -1.58
SCAMP2-209ENST00000567638 PRR15LQ9BU68 103 aa5.14□□□□□ -1.59
SCAMP2-209ENST00000567638 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
SCAMP2-209ENST00000567638 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
SCAMP2-209ENST00000567638 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
SCAMP2-209ENST00000567638 LINC01558Q9Y6Z2 57 aa5.06□□□□□ -1.6
SCAMP2-209ENST00000567638 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
SCAMP2-209ENST00000567638 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
SCAMP2-209ENST00000567638 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
SCAMP2-209ENST00000567638 UQCR11O14957 56 aa4.96□□□□□ -1.62
SCAMP2-209ENST00000567638 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
SCAMP2-209ENST00000567638 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
SCAMP2-209ENST00000567638 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
SCAMP2-209ENST00000567638 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
SCAMP2-209ENST00000567638 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
SCAMP2-209ENST00000567638 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
SCAMP2-209ENST00000567638 V9GYY9 64 aa4.88□□□□□ -1.63
SCAMP2-209ENST00000567638 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
SCAMP2-209ENST00000567638 Q1T7F1 81 aa4.84□□□□□ -1.63
SCAMP2-209ENST00000567638 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
SCAMP2-209ENST00000567638 MIR22HGQ0VDD5 57 aa4.83□□□□□ -1.64
SCAMP2-209ENST00000567638 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
SCAMP2-209ENST00000567638 K7ERS5 55 aa4.77□□□□□ -1.65
SCAMP2-209ENST00000567638 PSPHP1O15172 72 aa4.75□□□□□ -1.65
SCAMP2-209ENST00000567638 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
SCAMP2-209ENST00000567638 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
SCAMP2-209ENST00000567638 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
SCAMP2-209ENST00000567638 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
SCAMP2-209ENST00000567638 A6NED7 52 aa4.62□□□□□ -1.67
SCAMP2-209ENST00000567638 MT1AP04731 61 aa4.56□□□□□ -1.68
SCAMP2-209ENST00000567638 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
SCAMP2-209ENST00000567638 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
SCAMP2-209ENST00000567638 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
SCAMP2-209ENST00000567638 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SCAMP2-209ENST00000567638 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
SCAMP2-209ENST00000567638 ROMO1P60602 79 aa4.42□□□□□ -1.7
SCAMP2-209ENST00000567638 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
SCAMP2-209ENST00000567638 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
SCAMP2-209ENST00000567638 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
SCAMP2-209ENST00000567638 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
SCAMP2-209ENST00000567638 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
SCAMP2-209ENST00000567638 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
SCAMP2-209ENST00000567638 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
SCAMP2-209ENST00000567638 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
SCAMP2-209ENST00000567638 MT3P25713 68 aa4.16□□□□□ -1.74
SCAMP2-209ENST00000567638 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
SCAMP2-209ENST00000567638 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
SCAMP2-209ENST00000567638 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.74
SCAMP2-209ENST00000567638 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
SCAMP2-209ENST00000567638 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
SCAMP2-209ENST00000567638 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
SCAMP2-209ENST00000567638 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
SCAMP2-209ENST00000567638 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
SCAMP2-209ENST00000567638 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
SCAMP2-209ENST00000567638 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
SCAMP2-209ENST00000567638 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
SCAMP2-209ENST00000567638 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
SCAMP2-209ENST00000567638 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
SCAMP2-209ENST00000567638 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
SCAMP2-209ENST00000567638 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
SCAMP2-209ENST00000567638 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
SCAMP2-209ENST00000567638 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SCAMP2-209ENST00000567638 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
SCAMP2-209ENST00000567638 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
SCAMP2-209ENST00000567638 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
SCAMP2-209ENST00000567638 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
SCAMP2-209ENST00000567638 A0A0A0MQY5 61 aa2.77□□□□□ -1.97
SCAMP2-209ENST00000567638 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SCAMP2-209ENST00000567638 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
SCAMP2-209ENST00000567638 INE1O15225 51 aa2.61□□□□□ -1.99
SCAMP2-209ENST00000567638 H3BS24 57 aa2.57□□□□□ -2
SCAMP2-209ENST00000567638 PRM1P04553 51 aa2.25□□□□□ -2.05
SCAMP2-209ENST00000567638 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
SCAMP2-209ENST00000567638 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms