RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 RPS28P62857 69 aaKnown RBP5.83□□□□□ -1.48
PKD1-233ENST00000567355 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
PKD1-233ENST00000567355 Q1T7F1 81 aa5.78□□□□□ -1.48
PKD1-233ENST00000567355 UQCR11O14957 56 aa5.77□□□□□ -1.49
PKD1-233ENST00000567355 GPR98Q8WXG9 6306 aa5.76□□□□□ -1.49
PKD1-233ENST00000567355 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
PKD1-233ENST00000567355 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
PKD1-233ENST00000567355 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
PKD1-233ENST00000567355 HMCN1Q96RW7 5635 aa5.72□□□□□ -1.49
PKD1-233ENST00000567355 PSPHP1O15172 72 aa5.71□□□□□ -1.5
PKD1-233ENST00000567355 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
PKD1-233ENST00000567355 KRTAP5-4Q6L8H1 288 aa5.66□□□□□ -1.5
PKD1-233ENST00000567355 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
PKD1-233ENST00000567355 MT4P47944 62 aa5.61□□□□□ -1.51
PKD1-233ENST00000567355 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
PKD1-233ENST00000567355 A6NED7 52 aa5.58□□□□□ -1.52
PKD1-233ENST00000567355 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
PKD1-233ENST00000567355 K7ERS5 55 aa5.55□□□□□ -1.52
PKD1-233ENST00000567355 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
PKD1-233ENST00000567355 AHNAK2Q8IVF2 5795 aa5.47□□□□□ -1.53
PKD1-233ENST00000567355 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
PKD1-233ENST00000567355 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
PKD1-233ENST00000567355 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
PKD1-233ENST00000567355 CDC42SE1Q9NRR8 79 aa5.39□□□□□ -1.55
PKD1-233ENST00000567355 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
PKD1-233ENST00000567355 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
PKD1-233ENST00000567355 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
PKD1-233ENST00000567355 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
PKD1-233ENST00000567355 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
PKD1-233ENST00000567355 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
PKD1-233ENST00000567355 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
PKD1-233ENST00000567355 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
PKD1-233ENST00000567355 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
PKD1-233ENST00000567355 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
PKD1-233ENST00000567355 ROMO1P60602 79 aa5.16□□□□□ -1.58
PKD1-233ENST00000567355 KRTAP5-7Q6L8G8 165 aa5.13□□□□□ -1.59
PKD1-233ENST00000567355 MT1AP04731 61 aa5.02□□□□□ -1.61
PKD1-233ENST00000567355 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
PKD1-233ENST00000567355 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
PKD1-233ENST00000567355 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
PKD1-233ENST00000567355 PMAIP1Q13794 54 aa4.94□□□□□ -1.62
PKD1-233ENST00000567355 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
PKD1-233ENST00000567355 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
PKD1-233ENST00000567355 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
PKD1-233ENST00000567355 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
PKD1-233ENST00000567355 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
PKD1-233ENST00000567355 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
PKD1-233ENST00000567355 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
PKD1-233ENST00000567355 MT3P25713 68 aa4.58□□□□□ -1.68
PKD1-233ENST00000567355 PRAC1Q96KF2 57 aa4.58□□□□□ -1.68
PKD1-233ENST00000567355 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
PKD1-233ENST00000567355 AHNAKQ09666 5890 aaKnown RBP4.5□□□□□ -1.69
PKD1-233ENST00000567355 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
PKD1-233ENST00000567355 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
PKD1-233ENST00000567355 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
PKD1-233ENST00000567355 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
PKD1-233ENST00000567355 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
PKD1-233ENST00000567355 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
PKD1-233ENST00000567355 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
PKD1-233ENST00000567355 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
PKD1-233ENST00000567355 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
PKD1-233ENST00000567355 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
PKD1-233ENST00000567355 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
PKD1-233ENST00000567355 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
PKD1-233ENST00000567355 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
PKD1-233ENST00000567355 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
PKD1-233ENST00000567355 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
PKD1-233ENST00000567355 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
PKD1-233ENST00000567355 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
PKD1-233ENST00000567355 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
PKD1-233ENST00000567355 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
PKD1-233ENST00000567355 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
PKD1-233ENST00000567355 INE1O15225 51 aa2.91□□□□□ -1.94
PKD1-233ENST00000567355 H3BS24 57 aa2.86□□□□□ -1.95
PKD1-233ENST00000567355 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
PKD1-233ENST00000567355 PRM1P04553 51 aa2.63□□□□□ -1.99
PKD1-233ENST00000567355 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
PKD1-233ENST00000567355 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms