RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 LCE3BQ5TA77 95 aa7.51□□□□□ -1.21
RNF40-210ENST00000566811 ROMO1P60602 79 aa7.49□□□□□ -1.21
RNF40-210ENST00000566811 KRTAP19-5Q3LI72 72 aa7.49□□□□□ -1.21
RNF40-210ENST00000566811 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.22
RNF40-210ENST00000566811 KRTAP19-3Q7Z4W3 81 aa7.39□□□□□ -1.23
RNF40-210ENST00000566811 BRK1Q8WUW1 75 aa7.39□□□□□ -1.23
RNF40-210ENST00000566811 GPR98Q8WXG9 6306 aa7.39□□□□□ -1.23
RNF40-210ENST00000566811 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
RNF40-210ENST00000566811 LCE5AQ5TCM9 118 aa7.33□□□□□ -1.24
RNF40-210ENST00000566811 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
RNF40-210ENST00000566811 MT1GP13640 62 aa7.28□□□□□ -1.24
RNF40-210ENST00000566811 MT1LQ93083 61 aa7.25□□□□□ -1.25
RNF40-210ENST00000566811 DSTQ03001 7570 aaKnown RBP7.2□□□□□ -1.26
RNF40-210ENST00000566811 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
RNF40-210ENST00000566811 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
RNF40-210ENST00000566811 MT1MQ8N339 61 aa7.11□□□□□ -1.27
RNF40-210ENST00000566811 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
RNF40-210ENST00000566811 PMAIP1Q13794 54 aa6.98□□□□□ -1.29
RNF40-210ENST00000566811 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
RNF40-210ENST00000566811 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
RNF40-210ENST00000566811 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
RNF40-210ENST00000566811 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
RNF40-210ENST00000566811 HMCN1Q96RW7 5635 aa6.8□□□□□ -1.32
RNF40-210ENST00000566811 AHNAK2Q8IVF2 5795 aa6.79□□□□□ -1.32
RNF40-210ENST00000566811 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
RNF40-210ENST00000566811 MT4P47944 62 aa6.77□□□□□ -1.33
RNF40-210ENST00000566811 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
RNF40-210ENST00000566811 KRTAP5-10Q6L8G5 202 aa6.69□□□□□ -1.34
RNF40-210ENST00000566811 KRTAP5-4Q6L8H1 288 aa6.55□□□□□ -1.36
RNF40-210ENST00000566811 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
RNF40-210ENST00000566811 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
RNF40-210ENST00000566811 PRAC1Q96KF2 57 aa6.51□□□□□ -1.37
RNF40-210ENST00000566811 KRTAP5-5Q701N2 237 aaPredicted RBP6.5□□□□□ -1.37
RNF40-210ENST00000566811 KRTAP5-7Q6L8G8 165 aa6.49□□□□□ -1.37
RNF40-210ENST00000566811 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
RNF40-210ENST00000566811 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
RNF40-210ENST00000566811 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
RNF40-210ENST00000566811 KRTAP12-4P60329 112 aa6.26□□□□□ -1.41
RNF40-210ENST00000566811 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
RNF40-210ENST00000566811 KRTAP20-2Q3LI61 65 aa6.22□□□□□ -1.41
RNF40-210ENST00000566811 MT1AP04731 61 aa6.21□□□□□ -1.42
RNF40-210ENST00000566811 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
RNF40-210ENST00000566811 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
RNF40-210ENST00000566811 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
RNF40-210ENST00000566811 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
RNF40-210ENST00000566811 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
RNF40-210ENST00000566811 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
RNF40-210ENST00000566811 KRTAP6-2Q3LI66 62 aa5.72□□□□□ -1.49
RNF40-210ENST00000566811 AHNAKQ09666 5890 aaKnown RBP5.69□□□□□ -1.5
RNF40-210ENST00000566811 MT3P25713 68 aa5.68□□□□□ -1.5
RNF40-210ENST00000566811 MUC5ACP98088 5654 aa5.65□□□□□ -1.51
RNF40-210ENST00000566811 KRTAP5-8O75690 187 aa5.63□□□□□ -1.51
RNF40-210ENST00000566811 MUC5BQ9HC84 5762 aaPredicted RBP5.62□□□□□ -1.51
RNF40-210ENST00000566811 LUZP6Q538Z0 58 aa5.6□□□□□ -1.51
RNF40-210ENST00000566811 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
RNF40-210ENST00000566811 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
RNF40-210ENST00000566811 KRTAP5-1Q6L8H4 278 aa5.17□□□□□ -1.58
RNF40-210ENST00000566811 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
RNF40-210ENST00000566811 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
RNF40-210ENST00000566811 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
RNF40-210ENST00000566811 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
RNF40-210ENST00000566811 LCE1CQ5T751 118 aa4.75□□□□□ -1.65
RNF40-210ENST00000566811 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
RNF40-210ENST00000566811 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
RNF40-210ENST00000566811 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
RNF40-210ENST00000566811 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
RNF40-210ENST00000566811 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
RNF40-210ENST00000566811 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
RNF40-210ENST00000566811 INE1O15225 51 aa4.09□□□□□ -1.75
RNF40-210ENST00000566811 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
RNF40-210ENST00000566811 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
RNF40-210ENST00000566811 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
RNF40-210ENST00000566811 PRM1P04553 51 aa3.81□□□□□ -1.8
RNF40-210ENST00000566811 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
RNF40-210ENST00000566811 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
RNF40-210ENST00000566811 H3BS24 57 aa3.07□□□□□ -1.92
RNF40-210ENST00000566811 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
RNF40-210ENST00000566811 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 90.5 ms