RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 KRTAP2-1Q9BYU5 128 aa0.39□□□□□ -2.35
SMG1-212ENST00000566328 TP53AIP1Q9HCN2 124 aa0.39□□□□□ -2.35
SMG1-212ENST00000566328 A0A0D9SG42 100 aa0.38□□□□□ -2.35
SMG1-212ENST00000566328 LOC101927531A0A1B0GV80 90 aa0.38□□□□□ -2.35
SMG1-212ENST00000566328 A8MUN3 132 aa0.38□□□□□ -2.35
SMG1-212ENST00000566328 UQCRQO14949 82 aa0.38□□□□□ -2.35
SMG1-212ENST00000566328 KRTAP19-5Q3LI72 72 aa0.38□□□□□ -2.35
SMG1-212ENST00000566328 SPATA8Q6RVD6 105 aa0.38□□□□□ -2.35
SMG1-212ENST00000566328 CYSTM1Q9H1C7 97 aa0.38□□□□□ -2.35
SMG1-212ENST00000566328 SNURFQ9Y675 71 aa0.38□□□□□ -2.35
SMG1-212ENST00000566328 R4GN34 69 aa0.38□□□□□ -2.35
SMG1-212ENST00000566328 H0YAA0 97 aa0.37□□□□□ -2.35
SMG1-212ENST00000566328 MT4P47944 62 aa0.37□□□□□ -2.35
SMG1-212ENST00000566328 MP68P56378 58 aa0.37□□□□□ -2.35
SMG1-212ENST00000566328 KRTAP19-7Q3SYF9 63 aa0.37□□□□□ -2.35
SMG1-212ENST00000566328 LINC00643Q86TS7 51 aa0.37□□□□□ -2.35
SMG1-212ENST00000566328 CRIPTQ9P021 101 aa0.37□□□□□ -2.35
SMG1-212ENST00000566328 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
SMG1-212ENST00000566328 ATOX1O00244 68 aa0.36□□□□□ -2.35
SMG1-212ENST00000566328 MT1EP04732 61 aa0.36□□□□□ -2.35
SMG1-212ENST00000566328 ACYP2P14621 99 aa0.36□□□□□ -2.35
SMG1-212ENST00000566328 DMAC1Q96GE9 116 aa0.36□□□□□ -2.35
SMG1-212ENST00000566328 PRO2289Q9P1D8 64 aa0.36□□□□□ -2.35
SMG1-212ENST00000566328 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
SMG1-212ENST00000566328 TRAV7A0A075B6U4 112 aa0.35□□□□□ -2.35
SMG1-212ENST00000566328 FAM240AA0A1B0GVK7 77 aa0.35□□□□□ -2.35
SMG1-212ENST00000566328 CHKB-CPT1BH3BT56 60 aa0.35□□□□□ -2.35
SMG1-212ENST00000566328 ATP5EP2Q5VTU8 51 aa0.35□□□□□ -2.35
SMG1-212ENST00000566328 KRTAP19-3Q7Z4W3 81 aa0.35□□□□□ -2.35
SMG1-212ENST00000566328 C20orf197Q8N268 126 aa0.35□□□□□ -2.35
SMG1-212ENST00000566328 C10orf95Q9H7T3 257 aa0.35□□□□□ -2.35
SMG1-212ENST00000566328 SMIM26A0A096LP01 95 aa0.34□□□□□ -2.36
SMG1-212ENST00000566328 A0A1B0GU33 70 aa0.34□□□□□ -2.36
SMG1-212ENST00000566328 CCDC179H3BU77 68 aa0.34□□□□□ -2.36
SMG1-212ENST00000566328 MT1GP13640 62 aa0.34□□□□□ -2.36
SMG1-212ENST00000566328 COA5Q86WW8 74 aa0.34□□□□□ -2.36
SMG1-212ENST00000566328 MT1MQ8N339 61 aa0.34□□□□□ -2.36
SMG1-212ENST00000566328 MT1LQ93083 61 aa0.34□□□□□ -2.36
SMG1-212ENST00000566328 H3BPC8 53 aa0.33□□□□□ -2.36
SMG1-212ENST00000566328 H7BZZ5 65 aa0.33□□□□□ -2.36
SMG1-212ENST00000566328 J3QR89 54 aa0.33□□□□□ -2.36
SMG1-212ENST00000566328 LUZP6Q538Z0 58 aa0.33□□□□□ -2.36
SMG1-212ENST00000566328 SERP2Q8N6R1 65 aa0.33□□□□□ -2.36
SMG1-212ENST00000566328 SERP1Q9Y6X1 66 aa0.33□□□□□ -2.36
SMG1-212ENST00000566328 A0A1B0GU69 56 aa0.32□□□□□ -2.36
SMG1-212ENST00000566328 K7ERU9 68 aa0.32□□□□□ -2.36
SMG1-212ENST00000566328 COX7CP15954 63 aa0.32□□□□□ -2.36
SMG1-212ENST00000566328 KRTAP25-1Q3LHN0 102 aa0.32□□□□□ -2.36
SMG1-212ENST00000566328 KRTAP6-1Q3LI64 71 aa0.32□□□□□ -2.36
SMG1-212ENST00000566328 SPTSSBQ8NFR3 76 aa0.32□□□□□ -2.36
SMG1-212ENST00000566328 PSPHP1O15172 72 aa0.31□□□□□ -2.36
SMG1-212ENST00000566328 TNP1P09430 55 aa0.31□□□□□ -2.36
SMG1-212ENST00000566328 KRTAP20-2Q3LI61 65 aa0.31□□□□□ -2.36
SMG1-212ENST00000566328 SMIM20Q8N5G0 67 aa0.31□□□□□ -2.36
SMG1-212ENST00000566328 ANAPC13Q9BS18 74 aa0.31□□□□□ -2.36
SMG1-212ENST00000566328 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
SMG1-212ENST00000566328 PRR15LQ9BU68 103 aa0.3□□□□□ -2.36
SMG1-212ENST00000566328 MIR22HGQ0VDD5 57 aa0.29□□□□□ -2.36
SMG1-212ENST00000566328 LINC01558Q9Y6Z2 57 aa0.29□□□□□ -2.36
SMG1-212ENST00000566328 UQCR11O14957 56 aa0.28□□□□□ -2.36
SMG1-212ENST00000566328 A6NED7 52 aa0.27□□□□□ -2.37
SMG1-212ENST00000566328 MT1AP04731 61 aa0.27□□□□□ -2.37
SMG1-212ENST00000566328 Q1T7F1 81 aa0.27□□□□□ -2.37
SMG1-212ENST00000566328 ROMO1P60602 79 aa0.26□□□□□ -2.37
SMG1-212ENST00000566328 TMEM258P61165 79 aa0.25□□□□□ -2.37
SMG1-212ENST00000566328 RPS28P62857 69 aaKnown RBP0.25□□□□□ -2.37
SMG1-212ENST00000566328 CDC42SE1Q9NRR8 79 aa0.25□□□□□ -2.37
SMG1-212ENST00000566328 K7ERS5 55 aa0.24□□□□□ -2.37
SMG1-212ENST00000566328 ATP5EP56381 51 aaPredicted RBP0.24□□□□□ -2.37
SMG1-212ENST00000566328 V9GYY9 64 aa0.23□□□□□ -2.37
SMG1-212ENST00000566328 BRK1Q8WUW1 75 aa0.22□□□□□ -2.37
SMG1-212ENST00000566328 PMAIP1Q13794 54 aa0.21□□□□□ -2.38
SMG1-212ENST00000566328 PHGR1C9JFL3 82 aa0.2□□□□□ -2.38
SMG1-212ENST00000566328 PRO0628Q9UI54 55 aa0.17□□□□□ -2.38
SMG1-212ENST00000566328 PRM1P04553 51 aa0.15□□□□□ -2.39
SMG1-212ENST00000566328 KTN1-AS1Q86SY8 53 aa0.13□□□□□ -2.39
SMG1-212ENST00000566328 KRTAP21-1Q3LI58 79 aa0.12□□□□□ -2.39
SMG1-212ENST00000566328 INE1O15225 51 aa0.04□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 8.9 ms