RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
RNF40-208ENST00000565995 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
RNF40-208ENST00000565995 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
RNF40-208ENST00000565995 MT1EP04732 61 aa4.77□□□□□ -1.65
RNF40-208ENST00000565995 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
RNF40-208ENST00000565995 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
RNF40-208ENST00000565995 KRTAP5-10Q6L8G5 202 aa4.73□□□□□ -1.65
RNF40-208ENST00000565995 AHNAK2Q8IVF2 5795 aa4.7□□□□□ -1.66
RNF40-208ENST00000565995 MT1GP13640 62 aa4.69□□□□□ -1.66
RNF40-208ENST00000565995 MT4P47944 62 aa4.69□□□□□ -1.66
RNF40-208ENST00000565995 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
RNF40-208ENST00000565995 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
RNF40-208ENST00000565995 TNP1P09430 55 aa4.61□□□□□ -1.67
RNF40-208ENST00000565995 KRTAP5-7Q6L8G8 165 aa4.61□□□□□ -1.67
RNF40-208ENST00000565995 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
RNF40-208ENST00000565995 ROMO1P60602 79 aa4.6□□□□□ -1.67
RNF40-208ENST00000565995 MT1MQ8N339 61 aa4.57□□□□□ -1.68
RNF40-208ENST00000565995 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
RNF40-208ENST00000565995 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
RNF40-208ENST00000565995 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
RNF40-208ENST00000565995 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
RNF40-208ENST00000565995 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
RNF40-208ENST00000565995 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
RNF40-208ENST00000565995 MT1LQ93083 61 aa4.5□□□□□ -1.69
RNF40-208ENST00000565995 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
RNF40-208ENST00000565995 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
RNF40-208ENST00000565995 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
RNF40-208ENST00000565995 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
RNF40-208ENST00000565995 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
RNF40-208ENST00000565995 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
RNF40-208ENST00000565995 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
RNF40-208ENST00000565995 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
RNF40-208ENST00000565995 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
RNF40-208ENST00000565995 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
RNF40-208ENST00000565995 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
RNF40-208ENST00000565995 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
RNF40-208ENST00000565995 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
RNF40-208ENST00000565995 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.76
RNF40-208ENST00000565995 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
RNF40-208ENST00000565995 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
RNF40-208ENST00000565995 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
RNF40-208ENST00000565995 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
RNF40-208ENST00000565995 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
RNF40-208ENST00000565995 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
RNF40-208ENST00000565995 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
RNF40-208ENST00000565995 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
RNF40-208ENST00000565995 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
RNF40-208ENST00000565995 MT1AP04731 61 aa3.83□□□□□ -1.8
RNF40-208ENST00000565995 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
RNF40-208ENST00000565995 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
RNF40-208ENST00000565995 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
RNF40-208ENST00000565995 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
RNF40-208ENST00000565995 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
RNF40-208ENST00000565995 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
RNF40-208ENST00000565995 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
RNF40-208ENST00000565995 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
RNF40-208ENST00000565995 MT3P25713 68 aa3.51□□□□□ -1.85
RNF40-208ENST00000565995 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
RNF40-208ENST00000565995 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
RNF40-208ENST00000565995 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
RNF40-208ENST00000565995 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
RNF40-208ENST00000565995 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
RNF40-208ENST00000565995 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
RNF40-208ENST00000565995 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
RNF40-208ENST00000565995 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
RNF40-208ENST00000565995 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
RNF40-208ENST00000565995 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
RNF40-208ENST00000565995 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
RNF40-208ENST00000565995 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
RNF40-208ENST00000565995 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
RNF40-208ENST00000565995 INE1O15225 51 aa2.7□□□□□ -1.98
RNF40-208ENST00000565995 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
RNF40-208ENST00000565995 H3BS24 57 aa2.51□□□□□ -2.01
RNF40-208ENST00000565995 PRM1P04553 51 aa2.39□□□□□ -2.03
RNF40-208ENST00000565995 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
RNF40-208ENST00000565995 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
RNF40-208ENST00000565995 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
RNF40-208ENST00000565995 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 76.5 ms