RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 MT1MQ8N339 61 aa6.21□□□□□ -1.42
MAP1LC3B-207ENST00000565788 A8MU10 97 aa6.2□□□□□ -1.42
MAP1LC3B-207ENST00000565788 MT1LQ93083 61 aa6.2□□□□□ -1.42
MAP1LC3B-207ENST00000565788 LCE3AQ5TA76 89 aa6.14□□□□□ -1.43
MAP1LC3B-207ENST00000565788 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
MAP1LC3B-207ENST00000565788 TNP1P09430 55 aa6.1□□□□□ -1.43
MAP1LC3B-207ENST00000565788 MT4P47944 62 aa6.1□□□□□ -1.43
MAP1LC3B-207ENST00000565788 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
MAP1LC3B-207ENST00000565788 HMCN1Q96RW7 5635 aa6.08□□□□□ -1.44
MAP1LC3B-207ENST00000565788 ANAPC13Q9BS18 74 aa6.02□□□□□ -1.45
MAP1LC3B-207ENST00000565788 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
MAP1LC3B-207ENST00000565788 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
MAP1LC3B-207ENST00000565788 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
MAP1LC3B-207ENST00000565788 PRR15LQ9BU68 103 aa5.96□□□□□ -1.46
MAP1LC3B-207ENST00000565788 CCDC179H3BU77 68 aa5.94□□□□□ -1.46
MAP1LC3B-207ENST00000565788 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
MAP1LC3B-207ENST00000565788 LINC01558Q9Y6Z2 57 aa5.9□□□□□ -1.46
MAP1LC3B-207ENST00000565788 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
MAP1LC3B-207ENST00000565788 ATP5EP56381 51 aaPredicted RBP5.88□□□□□ -1.47
MAP1LC3B-207ENST00000565788 KRTAP5-10Q6L8G5 202 aa5.81□□□□□ -1.48
MAP1LC3B-207ENST00000565788 UQCR11O14957 56 aa5.77□□□□□ -1.49
MAP1LC3B-207ENST00000565788 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
MAP1LC3B-207ENST00000565788 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
MAP1LC3B-207ENST00000565788 TMEM258P61165 79 aa5.67□□□□□ -1.5
MAP1LC3B-207ENST00000565788 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
MAP1LC3B-207ENST00000565788 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
MAP1LC3B-207ENST00000565788 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
MAP1LC3B-207ENST00000565788 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
MAP1LC3B-207ENST00000565788 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
MAP1LC3B-207ENST00000565788 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
MAP1LC3B-207ENST00000565788 K7ERS5 55 aa5.53□□□□□ -1.52
MAP1LC3B-207ENST00000565788 PSPHP1O15172 72 aa5.44□□□□□ -1.54
MAP1LC3B-207ENST00000565788 LCE3CQ5T5A8 94 aa5.4□□□□□ -1.54
MAP1LC3B-207ENST00000565788 V9GYY9 64 aa5.39□□□□□ -1.55
MAP1LC3B-207ENST00000565788 Q1T7F1 81 aa5.36□□□□□ -1.55
MAP1LC3B-207ENST00000565788 MT1AP04731 61 aa5.27□□□□□ -1.57
MAP1LC3B-207ENST00000565788 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
MAP1LC3B-207ENST00000565788 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
MAP1LC3B-207ENST00000565788 A6NED7 52 aa5.23□□□□□ -1.57
MAP1LC3B-207ENST00000565788 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
MAP1LC3B-207ENST00000565788 ROMO1P60602 79 aa5.14□□□□□ -1.59
MAP1LC3B-207ENST00000565788 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
MAP1LC3B-207ENST00000565788 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.13□□□□□ -1.59
MAP1LC3B-207ENST00000565788 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
MAP1LC3B-207ENST00000565788 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
MAP1LC3B-207ENST00000565788 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
MAP1LC3B-207ENST00000565788 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
MAP1LC3B-207ENST00000565788 KRTAP5-11Q6L8G4 156 aa4.94□□□□□ -1.62
MAP1LC3B-207ENST00000565788 MUC5BQ9HC84 5762 aaPredicted RBP4.89□□□□□ -1.63
MAP1LC3B-207ENST00000565788 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
MAP1LC3B-207ENST00000565788 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
MAP1LC3B-207ENST00000565788 MT3P25713 68 aa4.81□□□□□ -1.64
MAP1LC3B-207ENST00000565788 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
MAP1LC3B-207ENST00000565788 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
MAP1LC3B-207ENST00000565788 PCP4P48539 62 aa4.64□□□□□ -1.67
MAP1LC3B-207ENST00000565788 BRK1Q8WUW1 75 aa4.28□□□□□ -1.72
MAP1LC3B-207ENST00000565788 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
MAP1LC3B-207ENST00000565788 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
MAP1LC3B-207ENST00000565788 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
MAP1LC3B-207ENST00000565788 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
MAP1LC3B-207ENST00000565788 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
MAP1LC3B-207ENST00000565788 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
MAP1LC3B-207ENST00000565788 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
MAP1LC3B-207ENST00000565788 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
MAP1LC3B-207ENST00000565788 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
MAP1LC3B-207ENST00000565788 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
MAP1LC3B-207ENST00000565788 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
MAP1LC3B-207ENST00000565788 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
MAP1LC3B-207ENST00000565788 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
MAP1LC3B-207ENST00000565788 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
MAP1LC3B-207ENST00000565788 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
MAP1LC3B-207ENST00000565788 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
MAP1LC3B-207ENST00000565788 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
MAP1LC3B-207ENST00000565788 PRM1P04553 51 aa2.64□□□□□ -1.99
MAP1LC3B-207ENST00000565788 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
MAP1LC3B-207ENST00000565788 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
MAP1LC3B-207ENST00000565788 INE1O15225 51 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 9 ms